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Clustering multiply imputed multivariate high-dimensional longitudinal profiles.

Liesbeth Bruckers1, Geert Molenberghs1,2, Paul Dendale1,3

  • 1I-BioStat, Universiteit Hasselt, Agoralaan, B-3590, Diepenbeek, Belgium.

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|April 25, 2017
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Summary
This summary is machine-generated.

We developed a new method for clustering incomplete multivariate functional data using multiple imputation and ensemble clustering. This approach effectively identifies patient subgroups with distinct health trajectories, as demonstrated in heart failure data analysis.

Keywords:
Cluster analysisData reductionFunctional data analysisMissing data

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Area of Science:

  • Statistics
  • Data Science
  • Biostatistics

Background:

  • Functional data analysis often requires complete data for techniques like principal component analysis (PCA).
  • Missing observations are common in longitudinal health studies, posing a challenge for standard analytical methods.

Purpose of the Study:

  • To propose and validate a novel method for clustering multivariate functional data with missing observations.
  • To address the challenge of dimension reduction techniques requiring complete data matrices in functional data analysis.

Main Methods:

  • Multiple imputation was used to complete the dataset, followed by clustering each imputed dataset.
  • Ensemble clustering was employed to synthesize partitions from imputed datasets, providing a robust final clustering.
  • Uncertainty in cluster membership was quantified using ensemble agreement and consensus clustering fuzziness.

Main Results:

  • The method was applied to heart failure (HF) patient data, utilizing daily measurements of four biomarkers.
  • The algorithm identified a latent structure, dividing HF patients into two distinct clusters based on blood pressure and weight evolution.
  • Data normalization (natural logarithm) and smoothing (cubic spline base) were applied to longitudinal outcomes.

Conclusions:

  • The proposed method effectively clusters multivariate functional data with missing values, revealing underlying patient heterogeneity.
  • The approach provides a reliable way to characterize cluster membership uncertainty in the presence of missing data.
  • The identified clusters in HF patients suggest different disease progression patterns, aiding clinical stratification.