Alternative Start Sites Downstream of Non-Sense Mutations Drive Antigen Presentation and Tolerance Induction to

Scott N Ashley1, Suryanarayan Somanathan1, Christian Hinderer1

  • 1Gene Therapy Program, Department of Medicine, University of Pennsylvania, Perelman School of Medicine, Philadelphia, PA 19104.

Insights

Gene therapy patients with premature termination codons (PTCs) may still develop immune tolerance. Alternative translation generates epitopes, inducing tolerance to wild-type transgene products despite truncated proteins.

Area of Science:

  • Immunology
  • Gene Therapy
  • Molecular Biology

Background:

  • Cytotoxic T lymphocyte (CTL) responses to transgene products are a key concern in gene therapy.
  • Genetic mutations, particularly premature termination codons (PTCs), can alter T cell responses to gene therapy vectors.
  • Individuals with PTCs may lack immune tolerance to C-terminal epitopes due to absent endogenous antigen presentation.

Purpose of the Study:

  • To investigate if human ornithine transcarbamylase (OTC) genes with PTCs can generate and present epitopes downstream of the termination codon.
  • To determine if expression of these PTC-containing OTC genes via adeno-associated virus (AAV) vectors can induce peripheral tolerance in mice.

Main Methods:

  • Utilized human OTC genes with various PTC-inducing nonsense mutations.
  • Employed adeno-associated virus (AAV) vectors for gene delivery in C57BL/6 mice.
  • Analyzed epitope generation and presentation from alternative translation start sites downstream of the stop codon.

Main Results:

  • PTC-inducing nonsense mutations in the human OTC gene can generate and present epitopes downstream of the termination codon.
  • Alternative translation start sites downstream of the stop codon are the primary mechanism for epitope generation.
  • AAV-mediated expression of these PTC-containing OTC genes induced peripheral tolerance to downstream epitopes in C57BL/6 mice.

Conclusions:

  • Despite the absence of full-length endogenous protein, patients with PTC-inducing nonsense mutations may present T cell epitopes downstream of the PTC.
  • This presentation of downstream epitopes can potentially induce tolerance to wild-type transgene products in gene therapy recipients.

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