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DINeR: Database for Insect Neuropeptide Research.
Joseph G C Yeoh1, Aniruddha A Pandit1, Meet Zandawala2
1Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, G12 8QQ Glasgow, Scotland, UK.
Insect Biochemistry and Molecular Biology
|May 16, 2017
Summary
The Database for Insect Neuropeptide Research (DINeR) consolidates neuropeptide data for over 400 insect species. This resource aids insect neuroendocrinology by standardizing information on neuropeptide sequences and functions.
Area of Science:
- Neuroscience
- Bioinformatics
- Entomology
Background:
- Neuropeptides regulate critical physiological processes in insects, including development and metabolism.
- Characterization of insect neuropeptides is sporadic, hindering comprehensive understanding.
- Advances in post-genomic technologies necessitate a centralized resource for insect neuropeptide information.
Purpose of the Study:
- To develop a consolidated, standardized, and user-friendly database for insect neuropeptide research.
- To leverage post-genomic technologies for efficient neuropeptide discovery and functional characterization.
- To create a comprehensive resource for insect neuroendocrinology.
Main Methods:
- Development of the web-based Database for Insect Neuropeptide Research (DINeR).
- Curated data collection from published literature on neuropeptide sequences, physiological functions, and receptor locations.
- Incorporation of standardized nomenclature for neuropeptide classification.
Main Results:
- DINeR includes data for 50 neuropeptide families across over 400 insect species.
- Contains approximately 4700 neuropeptide isoform amino acid sequences and over 200 records of physiological functionality.
- Provides neuropeptide family summaries, cladograms, sequence alignments, logos, and receptor binding site images.
Conclusions:
- DINeR offers a standardized and comprehensive resource for insect neuropeptide information.
- The database facilitates research in insect neuroendocrinology and related fields.
- Active maintenance ensures DINeR remains a valuable, up-to-date resource for the scientific community.
Keywords:
DINeRDatabaseInsect neuropeptideNeuroendocrinologyNeuropeptide hormonesNeuropeptide signalling
