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A framework for evaluating epidemic forecasts.

Farzaneh Sadat Tabataba1,2, Prithwish Chakraborty3, Naren Ramakrishnan3,4

  • 1Computer Science Department, Virginia Tech, 2202 Kraft Drive, Blacksburg/Virginia, 24060, USA. fstaba2@vt.edu.

BMC Infectious Diseases
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PubMed
Summary
This summary is machine-generated.

Developing a standardized evaluation framework is crucial for selecting optimal epidemic forecasting models. This study introduces a novel approach combining features, error measures, and ranking schemas for comprehensive forecast evaluation.

Keywords:
Epidemic forecastingEpidemic-FeaturesError MeasurePerformance evaluationRanking

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Area of Science:

  • Computational epidemiology
  • Mathematical modeling
  • Public health surveillance

Background:

  • Numerous epidemic forecasting methods exist, often categorized as deterministic vs. probabilistic or comparative vs. generative.
  • Comparative methods assess outbreak data against model outputs for trend prediction.
  • A key challenge is the absence of standardized evaluation metrics for algorithm and configuration selection.

Purpose of the Study:

  • To introduce a comprehensive evaluation framework for epidemic forecasting models.
  • To define epidemic features (Epi-features) and associated error measures for forecast assessment.
  • To address the need for nuanced evaluation beyond short-term predictions.

Main Methods:

  • Developed an evaluation framework integrating diverse features, error measures, and ranking schemas.
  • Defined and utilized specific epidemic features (Epi-features) to characterize forecast outputs.
  • Applied the framework to evaluate six forecasting methods for influenza prediction in the United States, focusing on long-term predictions.

Main Results:

  • Different error measures yield varying rankings for the same Epi-feature.
  • No single forecasting method consistently outperformed others across all Epi-features and error measures.
  • Consensus Ranking schemas were proposed to synthesize individual rankings and account for multiple error measures.

Conclusions:

  • A nuanced approach is necessary for evaluating epidemic forecasts.
  • Multiple forecasting methods should be combined for comprehensive predictions.
  • The proposed evaluation framework offers significant value to the computational epidemiology community.