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SU-E-I-71: Susceptibility Weighted Imaging (SWI) Software for Post-Processing of SWI Data
S Jambawalikar1,2, S Krishnamoorthy1,2, J So1,2
1Columbia University.
Medical Physics
|May 19, 2017
Summary
This study developed open-source software for processing susceptibility weighted (SWI) MRI images. The tool aids in visualizing and quantifying iron deposits in organs like the brain and liver.
Area of Science:
- Medical Imaging
- Biophysics
- Software Development
Background:
- Susceptibility Weighted Imaging (SWI) is crucial for visualizing paramagnetic substances like iron.
- Accurate post-processing of SWI data is essential for reliable analysis.
- Existing SWI processing methods may lack accessibility or require specialized software.
Purpose of the Study:
- To develop and provide an open-source software tool for post-processing SWI MRI data.
- To utilize both magnitude and phase data for enhanced SWI image generation.
- To create a user-friendly tool for researchers and clinicians.
Main Methods:
- SWI data acquired using a Philips 3T MRI scanner with specific parameters (TR=40ms, TE=25ms, FOV=22 cm, matrix=440x440, 40 slices).
- Homodyne filtering applied by converting magnitude and phase images to complex real and imaginary components.
- Software implemented in C++ utilizing the ITK (Image Registration and Segmentation Toolkit).
Main Results:
- An open-source SWI post-processing tool was successfully implemented using ITK.
- The software generates SWI maps for qualitative assessment of iron deposits.
- Filtered phase maps are produced for quantitative iron measurements in organs.
Conclusions:
- The developed SWI software provides qualitative maps of iron deposits in the brain and other organs.
- Post-processed images are suitable for MR Venography and studying iron-related diseases.
- This open-source tool facilitates research into iron accumulation in various pathological conditions.

