Related Experiment Video
Updated: Mar 2, 2026

Candidate Gene Testing in Clinical Cohort Studies with Multiplexed Genotyping and Mass Spectrometry
Published on: June 21, 2018
Genetic Testing among Children in a Complex Care Program
Krista Oei1,2, Robin Z Hayeems3,4, Wendy J Ungar5,6
1Faculty of Medicine, University of Toronto, Toronto, ON M5S 1A8, Canada. krista.oei@mail.utoronto.ca.
Insights
Genetic testing in complex care programs (CCPs) often fails to diagnose conditions. Children without a genetic diagnosis undergo more tests over longer, costlier periods, highlighting the need for advanced genomic sequencing.
Area of Science:
- Genetics
- Pediatrics
- Medical Diagnostics
Background:
- Complex care programs (CCPs) serve children with intricate health needs.
- The diagnostic yield of genetic testing in CCPs remains largely uncharacterized.
- Understanding genetic testing patterns is crucial for evaluating new genomic diagnostic tools.
Purpose of the Study:
- To determine the proportion of children in CCPs with undiagnosed genetic conditions.
- To analyze the duration, types, and costs associated with genetic testing in this population.
- To assess the diagnostic efficiency of current genetic testing strategies.
Main Methods:
- Retrospective analysis of 420 children in a CCP from 2010-2014.
- Detailed examination of genetic testing data for 63 children (20% sample).
- Comparison of testing characteristics between diagnosed and undiagnosed children.
Main Results:
- 48% of tested children received a genetic diagnosis.
- Children without a diagnosis underwent more tests (median 6 vs. 3) and sequence-level tests.
- Undiagnosed children experienced longer testing periods (median 4.12 years vs. 0.35 years) and higher costs (median C$8496 vs. C$2614).
- 52% of children remained undiagnosed after genetic testing.
Conclusions:
- Current genetic testing approaches have limited diagnostic yield in children within CCPs.
- A significant proportion of children in CCPs remain undiagnosed despite extensive testing.
- Integrating genome-wide sequencing could enhance diagnostic efficiency and outcomes for this population.
Abstract:
Little is known about the pattern of genetic testing and frequency of genetic diagnoses among children enrolled in structured complex care programs (CCPs). Such information may inform the suitability of emerging genome diagnostics for this population. The objectives were to describe the proportion of children with undiagnosed genetic conditions despite genetic testing and measure the testing period, types and costs of genetic tests used. A retrospective analysis of 420 children enrolled in Toronto's Hospital for Sick Children's CCP from January 2010 until June 2014 was conducted. Among those who underwent genetic testing (n = 319; 76%), a random sample of 20% (n = 63) was further analyzed. A genetic diagnosis was confirmed in 48% of those who underwent testing. Those with no genetic diagnosis underwent significantly more genetic tests than those with a confirmed genetic diagnosis [median interquartile range (IQR): six tests (4-9) vs. three tests (2-4), p = 0.002], more sequence-level tests and a longer, more expensive testing period than those with a genetic diagnosis [median (IQR): length of testing period: 4.12 years (1.73-8.42) vs. 0.35 years (0.12-3.04), p < 0.001; genetic testing costs C$8496 ($4399-$12,480) vs. C$2614 ($1605-$4080), p < 0.001]. A genetic diagnosis was not established for 52% of children. Integrating genome-wide sequencing into clinical care may improve diagnostic efficiency and yield in this population.
More Related Videos
09:16Array Comparative Genomic Hybridization Array CGH for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
08:22A Novel Strategy Combining Array-CGH, Whole-exome Sequencing and In Utero Electroporation in Rodents to Identify Causative Genes for Brain Malformations
Published on: December 1, 2017
Related Concept Videos
Genetic Screens
Forward genetic screens
Forward or “classical” genetic screens involve creating random mutations in an organism’s DNA using radiation, mutagens, or insertion of additional bases, which...
Behavioral Genetics and Its Designs
The primary methodologies used in behavior genetics include family studies, twin studies, and adoption studies, each providing unique...
Human Genetics
The complex relationship between genetics and psychology is observable through common biological components such...
Pedigree Analysis
Gene-Environment Interactions