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Updated: Mar 1, 2026

Reverse Genetic Approach to Identify Regulators of Pigmentation using Zebrafish
Published on: March 1, 2022
GENETIC AND COLOR INTERACTIONS AT A CONTACT ZONE OF ACANTHOCHROMIS POLYACANTHUS: A MARINE FISH LACKING PELAGIC LARVAE
1Australian Institute of Marine Science, PMB 3, Townsville, Q4810, Australia.
Abstract:
- Acanthochromis polyacanthus is an unusual tropical marine damselfish that uniquely lacks pelagic larvae and has lost the capacity for broad-scale dispersal among coral reefs. Different color morphs exist in different regions of the Great Barrier Reef, and morphs from northern and southern regions are genetically distinct. In the Hydrographers Passage area, which is a large break through the reef matrix in the central Great Barrier Reef that may have acted as a bottleneck on the migration of these animals during sea level rise, three morphs recognized from other regions were found on neighboring reefs. The transition between them is abrupt with three loci (AAT-2*, GPI-1*, and PGM*) showing allelic frequency patterns close to fixation between opposite alleles within a few kilometers. On two reefs (Hyde, Bebe), a pair of morphs was found to coexist and exhibited a habitat partitioning pattern with each morph restricted to one side on the reef and steep transitions in between. Outside these transition zones, phenotypes and genotypes matched those on surrounding reefs without coexistence and were little changed from reefs several hundred kilometers away. An electrophoretic survey across one transition zone on Hyde Reef showed steep genetic gradients along one kilometer of reef slope. Significant linkage disequilibria in samples collected in Hyde Reef as a result of dispersal of parental combinations of alleles into the center or because parental combinations of alleles confer greater fitness, allowed us to estimate the dispersal rate (189 m/generation) and the selection pressure on the marker loci (0.411). Finally, we investigated models that could lead to such a steep transition in genotypic and phenotypic combinations. Both contact zones on each side of Hyde Reef were associated with geomorphological discontinuities in the reef structure. We suggest that assortative mating may be a proximal mechanism for maintaining isolated each color morph, which could be reinforced by selective predation against hybrids outside the zone of their formation (i.e., the frequency-dependent selection model of Mallet and Barton (1989). Acanthochromis is a midwater planktivore and, when in coexistence, the two morphs forage in different habitats amid multispecific flocks of other damselfishes of matching colors.
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