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Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
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PATTERNS IN PHYLOGENETIC TREE BALANCE WITH VARIABLE AND EVOLVING SPECIATION RATES.

Stephen B Heard1

  • 1Department of Biological Sciences, University of Iowa, Iowa City, Iowa, 52242.

Evolution; International Journal of Organic Evolution
|June 1, 2017
PubMed
Summary
This summary is machine-generated.

Phylogenetic tree balance offers insights into macroevolution. Simulations show that heritable or variable speciation rates lead to imbalanced evolutionary trees, with imbalance increasing alongside rate variation magnitude.

Keywords:
Macroevolutionphylogenetic treespunctuated equilibriaspeciation ratestree balancetree topology

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Area of Science:

  • Evolutionary biology
  • Phylogenetics
  • Macroevolutionary dynamics

Background:

  • Phylogenetic tree shape, particularly balance, offers insights into macroevolutionary processes.
  • Understanding factors influencing tree balance is crucial for interpreting evolutionary history.

Purpose of the Study:

  • To explore patterns in phylogenetic tree balance using simulations.
  • To investigate how varying speciation rates through evolutionary history impact tree balance.

Main Methods:

  • Utilized a simulation approach to model evolutionary processes.
  • Examined several models where speciation rates varied over time within diversifying clades.

Main Results:

  • Heritable speciation rates, dependent on evolving traits, lead to imbalanced phylogenies.
  • Non-heritable variation in speciation rates can also cause imbalance, depending on the model.
  • The degree of imbalance increases with the magnitude of speciation rate variation.
  • For gradual evolution, imbalance reaches an asymptote below the theoretical maximum.
  • High levels of rate variation are needed to match imbalance observed in real phylogenetic data.

Conclusions:

  • Speciation rate variation, both heritable and non-heritable, significantly influences phylogenetic tree balance.
  • The findings have implications for understanding macroevolutionary patterns and interpreting phylogenetic data.