Repeat Rifaximin for Irritable Bowel Syndrome: No Clinically Significant Changes in Stool Microbial Antibiotic

M Pimentel1, B D Cash2, A Lembo3

  • 1GI Motility Program, Division of Gastroenterology, Cedars-Sinai Medical Center, 8730 Alden Drive, Suite 225E, Los Angeles, CA, 90048, USA. Mark.Pimentel@cshs.org.

Abstract

Insights

Repeat rifaximin treatment for IBS-D showed no long-term impact on gut bacteria

Area of Science:

  • Gastroenterology
  • Microbiology
  • Pharmacology

Background:

  • Rifaximin is an effective and safe treatment for diarrhea-predominant irritable bowel syndrome (IBS-D).
  • Understanding the impact of repeat rifaximin treatment on gut microbiota antibiotic susceptibility is crucial for long-term therapeutic strategies.

Purpose of the Study:

  • To evaluate the effect of repeat rifaximin treatment courses on the antibiotic susceptibility of fecal bacteria in patients with IBS-D.

Main Methods:

  • Patients responding to initial rifaximin treatment in the TARGET 3 study received repeat courses (rifaximin or placebo) in a double-blind phase.
  • Stool samples were collected at multiple time points for susceptibility testing against 11 antibiotics, including rifaximin and rifampin.
  • Bacterial and yeast isolates were identified, with a focus on common gut bacteria like Bacteroidaceae and Enterobacteriaceae.

Main Results:

  • Clostridium difficile and Staphylococcus isolates remained highly susceptible to rifaximin and rifampin throughout the study.
  • No long-term cross-resistance was observed in key bacterial groups (Bacteroidaceae, Enterobacteriaceae, Enterococcaceae) to rifampin or other tested antibiotics following rifaximin exposure.

Conclusions:

  • Short-term, repeat treatment with rifaximin does not appear to induce long-term changes in the antibiotic susceptibility of the gut microbiota.
  • These findings support the continued use of rifaximin for managing IBS-D without significant concerns for developing antibiotic resistance in the gut microbiome.

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