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Updated: Feb 28, 2026

In Vivo Biosensor Tracks Non-apoptotic Caspase Activity in Drosophila
Published on: November 27, 2016
Coupled Caspase and N-End Rule Ligase Activities Allow Recognition and Degradation of Pluripotency Factor LIN-28
Benjamin P Weaver1, Yi M Weaver1, Shohei Mitani2
1The Howard Hughes Medical Institute and Department of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO 80309, USA.
Abstract:
Recent findings suggest that components of the classical cell death machinery also have important non-cell-death (non-apoptotic) functions in flies, nematodes, and mammals. However, the mechanisms for non-canonical caspase substrate recognition and proteolysis, and the direct roles for caspases in gene expression regulation, remain largely unclear. Here we report that CED-3 caspase and the Arg/N-end rule pathway cooperate to inactivate the LIN-28 pluripotency factor in seam cells, a stem-like cell type in Caenorhabditis elegans, thereby ensuring proper temporal cell fate patterning. Importantly, the caspase and the E3 ligase execute this function in a non-additive manner. We show that CED-3 caspase and the E3 ubiquitin ligase UBR-1 form a complex that couples their in vivo activities, allowing for recognition and rapid degradation of LIN-28 and thus facilitating a switch in developmental programs. The interdependence of these proteolytic activities provides a paradigm for non-apoptotic caspase-mediated protein inactivation.
Insights
The CED-3 caspase and UBR-1 E3 ligase inactivate the LIN-28 pluripotency factor in Caenorhabditis elegans stem cells. This non-apoptotic function ensures proper cell fate patterning during development.
Area of Science:
- Cell biology
- Developmental biology
- Molecular genetics
Background:
- Cell death machinery components, like caspases, have non-apoptotic roles in various organisms.
- Mechanisms of non-canonical caspase substrate recognition and regulation of gene expression by caspases are not fully understood.
Purpose of the Study:
- To elucidate the mechanisms of non-apoptotic caspase function in regulating gene expression and developmental patterning.
- To investigate the interaction between caspases and the Arg/N-end rule pathway in controlling pluripotency factors.
Main Methods:
- Utilized Caenorhabditis elegans as a model organism.
- Investigated the roles of CED-3 caspase and UBR-1 E3 ligase in seam cells.
- Analyzed the inactivation of the LIN-28 pluripotency factor.
Main Results:
- CED-3 caspase and the UBR-1 E3 ligase cooperate to inactivate the LIN-28 pluripotency factor in seam cells.
- This inactivation is crucial for proper temporal cell fate patterning.
- CED-3 and UBR-1 function in a non-additive manner, forming a complex to degrade LIN-28.
Conclusions:
- Caspases and E3 ligases can form complexes to mediate non-apoptotic protein inactivation.
- This mechanism facilitates developmental program switches by regulating pluripotency factors.
- Highlights a novel role for caspases in gene expression regulation beyond cell death.
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