Related Experiment Video
Updated: Feb 28, 2026

09:29
A Complete Pipeline for Isolating and Sequencing MicroRNAs, and Analyzing Them Using Open Source Tools
Published on: August 21, 2019
8.0K
Deciphering the role of microRNA - A step by step guide
Siddharth Manvati1, Kailash Chandra Mangalhara2, Juveria Khan1
1School of Biotechnology, Jawaharlal Nehru University, New Mehrauli Road, Saraswatipuram, New Delhi 110067, India.
Gene Expression Patterns : GEP
|June 13, 2017
Summary
This study provides a 5-step guide to understanding microRNA (miRNA) gene regulation. It demonstrates how miR-145a-5p down-regulates ADD3 and BRCA2 mRNA expression.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- MicroRNAs (miRNAs) are small non-coding RNAs crucial for post-transcriptional gene regulation.
- Understanding pathway-specific miRNA effects is vital for elucidating biological mechanisms but often lacks comprehensive guidance for researchers.
- Specific information on miRNA research approaches is scarce, hindering novel target identification.
Purpose of the Study:
- To provide a practical, 5-step perspective for unraveling the specific roles of microRNAs in biological pathways.
- To serve as a guide for identifying novel microRNA targets.
- To illustrate the methodology using miR-145a-5p as a specific example.
Main Methods:
- Bioinformatic analysis to predict potential microRNA targets.
- Experimental validation using assays to confirm gene expression changes.
- A step-by-step approach detailing methods for microRNA target identification.
Main Results:
- The study successfully identified novel targets for miR-145a-5p.
- miR-145a-5p was shown to down-regulate the mRNA expression of ADD3 and BRCA2.
- The described perspective facilitates the identification of microRNA targets.
Conclusions:
- The developed 5-step perspective effectively guides researchers in understanding microRNA functions and identifying novel targets.
- miR-145a-5p serves as a validated example, demonstrating its role in regulating ADD3 and BRCA2 expression.
- This approach aids in advancing research on microRNA-mediated gene regulation and its biological implications.
Related Concept Videos
MicroRNAs
4.2K
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
4.2K
MicroRNAs
24.4K
MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
24.4K
RNA Interference
28.3K
RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
28.3K
Experimental RNAi
8.1K
RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
8.1K
siRNA - Small Interfering RNAs
18.8K
Small interfering RNAs, or siRNAs, are short regulatory RNA molecules that can silence genes post-transcriptionally, as well as the transcriptional level in some cases. siRNAs are important for protecting cells against viral infections and silencing transposable genetic elements.
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
In the cytoplasm, siRNA is processed from a double-stranded RNA, which comes from either endogenous DNA transcription or exogenous sources like a virus. This double-stranded RNA is then cleaved by the...
18.8K
Regulation of Expression Occurs at Multiple Steps
26.7K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
26.7K

