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Updated: Feb 28, 2026

On-Site Sampling and Extraction of Brain Tumors for Metabolomics and Lipidomics Analysis
Published on: May 31, 2020
Metabolomic signature of brain cancer
Renu Pandey1, Laura Caflisch2, Alessia Lodi1
1Department of Nutritional Sciences, The University of Texas at Austin, Austin, Texas.
Abstract:
Despite advances in surgery and adjuvant therapy, brain tumors represent one of the leading causes of cancer-related mortality and morbidity in both adults and children. Gliomas constitute about 60% of all cerebral tumors, showing varying degrees of malignancy. They are difficult to treat due to dismal prognosis and limited therapeutics. Metabolomics is the untargeted and targeted analyses of endogenous and exogenous small molecules, which charact erizes the phenotype of an individual. This emerging "omics" science provides functional readouts of cellular activity that contribute greatly to the understanding of cancer biology including brain tumor biology. Metabolites are highly informative as a direct signature of biochemical activity; therefore, metabolite profiling has become a promising approach for clinical diagnostics and prognostics. The metabolic alterations are well-recognized as one of the key hallmarks in monitoring disease progression, therapy, and revealing new molecular targets for effective therapeutic intervention. Taking advantage of the latest high-throughput analytical technologies, that is, nuclear magnetic resonance (NMR) spectroscopy and mass spectrometry (MS), metabolomics is now a promising field for precision medicine and drug discovery. In the present report, we review the application of metabolomics and in vivo metabolic profiling in the context of adult gliomas and paediatric brain tumors. Analytical platforms such as high-resolution (HR) NMR, in vivo magnetic resonance spectroscopic imaging and high- and low-resolution MS are discussed. Moreover, the relevance of metabolic studies in the development of new therapeutic strategies for treatment of gliomas are reviewed.
Insights
Metabolomics offers a new approach to understanding brain tumors by analyzing small molecules. This technique aids in diagnosing, predicting, and developing targeted therapies for gliomas.
Area of Science:
- Biochemistry
- Oncology
- Metabolomics
Background:
- Brain tumors, particularly gliomas, are a major cause of cancer mortality with limited treatment options.
- Metabolomics analyzes small molecules to reveal cellular phenotypes and biological activity.
- Metabolic alterations are key indicators of cancer progression and potential therapeutic targets.
Purpose of the Study:
- To review the application of metabolomics and in vivo metabolic profiling in adult gliomas and pediatric brain tumors.
- To discuss analytical platforms for metabolomic analysis in brain tumor research.
- To explore the relevance of metabolic studies for developing new glioma therapies.
Main Methods:
- Utilizing high-throughput analytical technologies such as nuclear magnetic resonance (NMR) spectroscopy and mass spectrometry (MS).
- Employing high-resolution (HR) NMR, in vivo magnetic resonance spectroscopic imaging, and high- and low-resolution MS.
- Applying metabolomics for untargeted and targeted analyses of endogenous and exogenous small molecules.
Main Results:
- Metabolite profiling provides direct signatures of biochemical activity, crucial for diagnostics and prognostics.
- Metabolomics offers functional readouts of cellular activity, enhancing understanding of brain tumor biology.
- Metabolic studies are vital for monitoring disease progression and identifying novel therapeutic targets.
Conclusions:
- Metabolomics is a promising field for precision medicine and drug discovery in brain tumor treatment.
- In vivo metabolic profiling aids in understanding glioma biology and developing targeted interventions.
- This review highlights the potential of metabolomics in advancing therapeutic strategies for gliomas.
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