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Updated: Feb 28, 2026

Novel 3D/VR Interactive Environment for MD Simulations, Visualization and Analysis
Published on: December 18, 2014
Comprehensive modelling and simulation of cylindrical nanoparticles manipulation by using a virtual reality
Moharam Habibnejad Korayem1, Ali Kafash Hoshiar2, Maedeh Ghofrani3
1Robotic Research Laboratory, Center of Excellence in Experimental Solid Mechanics and Dynamics, School of Mechanical Engineering, Iran University of Science and Technology, Narmak, Tehran, Iran.
This study introduces a virtual reality environment for atomic force microscope (AFM) nanoparticle manipulation, enabling real-time observation during nanostructure construction. This overcomes limitations in visualizing nanoparticle displacement for enhanced nanorobotic applications.
Area of Science:
- Nanotechnology
- Nanorobotics
- Atomic Force Microscopy
Background:
- Atomic force microscope (AFM) robots are key tools in nanotechnology for manipulating nanoparticles and building nanostructures.
- A significant limitation in AFM-based manipulation is the lack of simultaneous visual feedback during nanoparticle displacement.
Purpose of the Study:
- To develop a virtual reality (VR) environment for real-time observation of nanoparticle manipulation using AFM.
- To overcome the limitations of simultaneous visualization in AFM-based nanomanipulation.
Main Methods:
- Processed AFM images to determine nanoparticle positions and dimensions.
- Dynamically modeled nanoparticle transfer and simulated critical force-time diagrams for controlled displacement.
- Developed VR simulations for rectangular, V-shape, and dagger-shape cantilevers.
Main Results:
- Successfully simulated controlled nanoparticle displacement using AFM.
- The VR environment enabled visualization of nanoparticle manipulation in a liquid medium.
- Demonstrated the feasibility of simulating manipulation with different cantilever shapes.
Conclusions:
- The developed VR environment effectively addresses the challenge of real-time observation in AFM-based nanoparticle manipulation.
- This approach enhances the precision and control in nanostructure construction and biological particle manipulation.
- The study paves the way for more intuitive and efficient nanomanipulation techniques.

