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In Silico Identification and Characterization of circRNAs During Host-Pathogen Interactions
Published on: October 21, 2022
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Sensing Self and Foreign Circular RNAs by Intron Identity
Y Grace Chen1, Myoungjoo V Kim2, Xingqi Chen1
1Center for Personal Dynamic Regulomes and Program in Epithelial Biology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Molecular Cell
|June 20, 2017
Summary
Circular RNAs (circRNAs) trigger innate immunity and protect against viral infections. The intron sequence within circRNAs determines self versus non-self recognition by the immune system.
Area of Science:
- Immunology
- Molecular Biology
- Virology
Background:
- Circular RNAs (circRNAs) are RNA molecules with a unique head-to-tail structure.
- Their functions, particularly in the immune system, remain largely unexplored.
Purpose of the Study:
- To investigate the role of circRNAs in innate immunity and viral protection.
- To identify the mechanisms by which circRNAs are recognized by the host immune system.
Main Methods:
- Transfection of in vitro generated circRNAs into mammalian cells.
- Assessing the induction of innate immunity genes and protection against viral infection.
- Investigating the role of the RIG-I sensor and circRNA structure in immune activation.
Main Results:
- Transfected circRNAs potently induced innate immunity genes and protected against viral infection.
- The Retinoic acid-inducible gene I (RIG-I) sensor is essential for recognizing foreign circRNAs.
- Immune activation by circRNAs is independent of sequence or structure, but dependent on the programming intron, distinguishing self from non-self.
Conclusions:
- CircRNAs are recognized by the innate immune system, specifically via RIG-I.
- Introns play a critical role in circRNA biogenesis and self-nonself discrimination.
- This study reveals a novel mechanism for immune surveillance involving circRNAs and their introns.
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