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Methodology for the Study of Horizontal Gene Transfer in Staphylococcus aureus
Published on: March 10, 2017
The mobile dso-gene-sso element in rolling-circle plasmids of staphylococci reflects the evolutionary history of its
T M Wassenaar1,2, A Cabal1,3
1Molecular Microbiology and Genomics Consultants, Zotzenheim, Germany.
Abstract:
The qacC and lnuA genes of Staphylococcus species were recently proposed to comprise a mobile element when residing on rolling-circle plasmids. Here we present other examples of resistance genes on staphylococcal rolling-circle plasmids, including fosB producing resistance to fosfomycin, cat resulting in resistance to chloramphenicol and cadB for resistance to the toxic heavy metal cadmium. For three of these genes (qacC, lnuA and fosB), evidence was obtained that the genes have spread between different plasmid backgrounds. The lack of mutations in qacC suggests that the spread occurred relatively recently, while the build up of mutations in lnuA and fosB suggests their mobilization occurred in the more distant past. These observations can be explained by the use of the respective antibiotics over time. However, the cat and cadB genes sequences analysed had not collected any mutations, an observation that is not completely understood but possible explanations are discussed.
Significance And Impact Of The Study:
We have analysed five resistance genes in Staphylococcus aureus that are positioned between the replication elements of rolling-circle plasmids. For three of these genes, evidence was obtained indicative of recent mobilization. The historical use of the antibiotics to which the genes produce resistance could be related to the number of mutations collected in these genes. However, two other resistance genes have not collected any mutations over time, and the reasons for this are discussed. The analyses presented provide insights into the spread and evolution of antibiotic resistance genes.
Insights
Mobile resistance genes on Staphylococcus rolling-circle plasmids, including those for fosfomycin and chloramphenicol, show varying mutation rates. This suggests different timelines for their spread and evolution, linked to antibiotic usage.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Rolling-circle plasmids in Staphylococcus species harbor mobile genetic elements.
- Previous studies identified qacC and lnuA genes as mobile elements on these plasmids.
Purpose of the Study:
- To identify additional resistance genes located on staphylococcal rolling-circle plasmids.
- To investigate the evolutionary history and spread of these resistance genes.
Main Methods:
- Sequence analysis of resistance genes (fosB, cat, cadB) on staphylococcal rolling-circle plasmids.
- Comparative analysis of gene sequences to detect mutations and infer evolutionary timelines.
Main Results:
- Identified fosB, cat, and cadB genes conferring resistance to fosfomycin, chloramphenicol, and cadmium, respectively, on rolling-circle plasmids.
- Evidence suggests recent mobilization for qacC, lnuA, and fosB genes, with mutation accumulation correlating with historical antibiotic use.
- The cat and cadB genes showed no accumulated mutations, indicating a different evolutionary trajectory or recent acquisition.
Conclusions:
- Rolling-circle plasmids facilitate the spread of diverse antibiotic and heavy metal resistance genes in Staphylococcus.
- The accumulation of mutations in resistance genes correlates with their historical usage, providing insights into their evolution.
- The lack of mutations in some genes highlights complexities in understanding the dynamics of mobile resistance elements.
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