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Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
Autophosphorylation Affects Substrate-Binding Affinity of Tobacco Ca2+-Dependent Protein Kinase1
Takeshi Ito1, Sarahmi Ishida2, Shota Oe1
1Department of Biological Science, Graduate School of Science, Hiroshima University, Kagamiyama, Higashi-Hiroshima 739-8526, Japan.
Abstract:
Protein kinases regulate diverse physiological processes. Because many kinases preserve inherent autophosphorylation capability, autophosphorylation appears to be one of the most important mechanisms for cellular signaling. However, physiological functions of autophosphorylation are still largely unknown, other than the self-activation by phosphorylation of activation loop in the catalytic domain. REPRESSION OF SHOOT GROWTH (RSG) is the transcription factor involved in gibberellin (GA) feedback regulation. The tobacco (Nicotiana tabacum) Ca2+-dependent protein kinase, NtCDPK1, phosphorylates RSG, resulting in the negative regulation of RSG. NtCDPK1 was previously shown to be autophosphorylated in a Ca2+-dependent manner. Here, we investigated the functional importance of autophosphorylation in NtCDPK1. Ser-6 and Thr-21 were identified as autophosphorylation sites of NtCDPK1. Autophosphorylation not only reduced the binding affinity of NtCDPK1 for RSG, but also inhibited the homodimerization of NtCDPK1. Furthermore, autophosphorylation decreased the phosphorylation efficiency of RSG yet increased that of myelin basic protein. Ser-6 and Thr-21 of NtCDPK1 were phosphorylated in response to GAs in plants. The substitution of these autophosphorylation sites with Ala enhanced the NtCDPK1 overexpression-induced sensitization of seeds to a GA biosynthetic inhibitor during germination. These results suggest new functions of autophosphorylation in CDPKs, namely, autophosphorylation can prevent the excessive phosphorylation of substrates and alter the substrate preference of CDPKs.
Insights
Autophosphorylation of tobacco calcium-dependent protein kinase 1 (NtCDPK1) regulates its interaction with REPRESSION OF SHOOT GROWTH (RSG). This process alters substrate preference and prevents excessive substrate phosphorylation, impacting gibberellin signaling.
Area of Science:
- Plant molecular biology
- Enzymology
- Cellular signaling
Background:
- Protein kinases are crucial regulators of physiological processes.
- Autophosphorylation is a common kinase mechanism, but its physiological roles beyond self-activation are largely unknown.
- REPRESSION OF SHOOT GROWTH (RSG) is a transcription factor involved in gibberellin (GA) feedback regulation, negatively regulated by tobacco NtCDPK1.
Purpose of the Study:
- To investigate the functional importance of autophosphorylation in NtCDPK1.
- To identify autophosphorylation sites and their impact on NtCDPK1 activity and substrate interaction.
- To elucidate the role of NtCDPK1 autophosphorylation in plant GA responses.
Main Methods:
- Site-directed mutagenesis to identify autophosphorylation sites (Ser-6 and Thr-21).
- In vitro assays to assess NtCDPK1 binding affinity to RSG, homodimerization, and substrate phosphorylation.
- In planta analysis of NtCDPK1 overexpression and GA response.
Main Results:
- Autophosphorylation at Ser-6 and Thr-21 reduced NtCDPK1 binding affinity for RSG and inhibited homodimerization.
- Autophosphorylation decreased RSG phosphorylation efficiency but increased myelin basic protein phosphorylation.
- NtCDPK1 autophosphorylation sites were phosphorylated in response to GAs, and their mutation affected seed germination sensitivity.
Conclusions:
- Autophosphorylation of NtCDPK1 plays a regulatory role in cellular signaling beyond self-activation.
- Autophosphorylation prevents excessive substrate phosphorylation and alters substrate preference in calcium-dependent protein kinases (CDPKs).
- These findings reveal novel functions of autophosphorylation in modulating plant hormone responses and gene regulation.
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