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Identification of Rare Bacterial Pathogens by 16S rRNA Gene Sequencing and MALDI-TOF MS
Published on: July 11, 2016
Four new species of Talaromyces from clinical sources
Marcela Guevara-Suarez1, Deanna A Sutton2, Josepa Gené1
1Unitat de Micologia, Facultat de Medicina i Ciències de la Salut and IISPV, Universitat Rovira i Virgili, Reus, Spain.
Abstract:
The genus Talaromyces constitutes an important group of molds with species that are mainly found in soil, indoor environments and food products. Traditionally, it has been considered, together with Eupenicillium, the teleomorphic state of Penicillium. However, the taxonomy of these fungi has changed considerably, and Talaromyces currently includes sexually and asexually reproducing species. In a previous study of the occurrence of penicillium-like fungi from clinical samples in the USA, we used the combined phylogeny of the internal transcribed spacer (ITS) region of the rDNA and β-tubulin (BenA) gene to identify 31 isolates of Talaromyces, 85 of Penicillium and two of Rasamsonia. However, seven isolates of Talaromyces were assigned to the corresponding sections but not to any particular species. In this study, we have resolved the taxonomy of these isolates through a multilocus sequence analysis of the ITS, fragments of the BenA, calmodulin (CaM), and RNA polymerase II second largest subunit (RPB2) genes, and a detailed phenotypic study. As a result, four new species are described and illustrated, ie Talaromyces alveolaris, T. georgiensis, T. minnesotensis and T. rapidus.
Insights
This study resolves the taxonomy of seven Talaromyces mold isolates from clinical samples. Multilocus sequence analysis and phenotypic data reveal four new species: Talaromyces alveolaris, T. georgiensis, T. minnesotensis, and T. rapidus.
Area of Science:
- Mycology
- Fungal Taxonomy
- Molecular Biology
Background:
- The genus Talaromyces includes molds commonly found in soil, indoor environments, and food.
- Talaromyces was traditionally considered the teleomorphic state of Penicillium, but its taxonomy has evolved to include sexually and asexually reproducing species.
- Previous studies identified Talaromyces, Penicillium, and Rasamsonia in clinical samples, with seven Talaromyces isolates remaining unidentified at the species level.
Purpose of the Study:
- To resolve the taxonomic classification of seven previously unidentified Talaromyces isolates.
- To describe and illustrate four new Talaromyces species based on comprehensive analysis.
Main Methods:
- Multilocus sequence analysis using the internal transcribed spacer (ITS) region of rDNA, beta-tubulin (BenA), calmodulin (CaM), and RNA polymerase II second largest subunit (RPB2) genes.
- Detailed phenotypic characterization of the fungal isolates.
- Phylogenetic analysis to determine species relationships.
Main Results:
- The taxonomic identity of seven Talaromyces isolates was resolved.
- Four new species of Talaromyces were identified and described: Talaromyces alveolaris, Talaromyces georgiensis, Talaromyces minnesotensis, and Talaromyces rapidus.
Conclusions:
- The study expands the known diversity within the genus Talaromyces.
- Accurate identification of Talaromyces species is crucial for understanding their ecological roles and potential clinical significance.
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