High-throughput electrophysiological assays for voltage gated ion channels using SyncroPatch 768PE
Tianbo Li1, Gang Lu1, Eugene Y Chiang2
1Department of Biochemical and Cellular Pharmacology, Genentech Inc., South San Francisco, California, United States of America.
Plos One
|July 7, 2017
Summary
Automated patch clamp (APC) platforms enhance ion channel drug discovery. The SyncroPatch 768PE platform achieves high throughput and data quality for voltage-gated sodium channel (Nav1.7) assays and endogenous potassium channel (Kv1.3) recordings.
Area of Science:
- Electrophysiology
- Pharmacology
- Biophysics
Background:
- Ion channels are crucial physiological regulators and drug targets.
- Patch clamp electrophysiology is the gold standard for ion channel studies but suffers from low throughput.
- Automated patch clamp (APC) platforms aim to increase throughput but vary in performance.
Purpose of the Study:
- To evaluate the SyncroPatch 768PE, a new APC platform, for high-throughput ion channel drug discovery.
- To develop and validate a robust APC assay for the voltage-gated sodium channel Nav1.7.
- To demonstrate the platform's capability in recording endogenous ion channels from primary cells.
Main Methods:
- Utilized the SyncroPatch 768PE for parallel recordings.
- Optimized cell patching parameters and a two-step voltage protocol for Nav1.7 assay development.
- Tested reference compounds for Nav1.7 IC50 and screened 10,000 compounds.
- Recorded endogenous Kv1.3 channels in primary T cells.
Main Results:
- The Nav1.7 assay demonstrated high consistency with manual patch clamp (R > 0.9).
- Achieved a 79% success rate in a pilot screen of 10,000 compounds.
- Demonstrated robust assay performance with ~6,000 data points daily throughput and a Z' factor of 0.72.
- Successfully recorded endogenous Kv1.3 channels in primary T cells.
Conclusions:
- The SyncroPatch 768PE is a powerful, high-throughput platform for ion channel research.
- The developed APC assay is suitable for Nav1.7 drug discovery.
- The platform enables characterization of endogenous ion channels in primary cells, advancing drug discovery efforts.


