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Updated: Feb 27, 2026

Intestinal Epithelial Regeneration in Response to Ionizing Irradiation
Published on: July 27, 2022
Intestinal Enteroendocrine Lineage Cells Possess Homeostatic and Injury-Inducible Stem Cell Activity.
Kelley S Yan1, Olivier Gevaert2, Grace X Y Zheng3
1Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305, USA; Columbia Center for Human Development, Columbia Stem Cell Initiative, Department of Medicine, Division of Digestive and Liver Diseases, Department of Genetics and Development, Columbia University Medical Center, New York, NY 10032, USA.
Mature enteroendocrine cells act as intestinal stem cells (ISCs), contributing to gut regeneration. This study identifies Prox1+ cells as a key ISC reservoir, revealing cellular plasticity in the intestinal epithelium.
Area of Science:
- Gastroenterology
- Stem Cell Biology
- Developmental Biology
Background:
- Intestinal stem cells (ISCs) are crucial for maintaining gut homeostasis and regeneration.
- Multiple cell populations have shown potential ISC activity, but their inter-relationships remain unclear.
Purpose of the Study:
- To investigate the relationships between different putative mouse ISC populations.
- To characterize the stem cell potential of Prox1+ cells within the intestinal epithelium.
Main Methods:
- Comparative RNA-sequencing (RNA-seq) of various ISC populations.
- Single-cell mRNA sequencing (scRNA-seq) of Prox1-GFP+ cells.
- In vitro clonogenic assays.
- In vivo lineage tracing after radiation injury.
Main Results:
- Transcriptomes of most cycling ISC populations resemble Lgr5+ ISCs.
- Bmi1-GFP+ cells are distinct and enriched for enteroendocrine (EE) markers like Prox1.
- Prox1-GFP+ cells demonstrate sustained in vitro clonogenic growth and form long-lived clones in vivo.
- scRNA-seq identified two Prox1-GFP+ subsets: mature EE cells and a progenitor-like population expressing EE, tuft cell, Lgr5, and Ascl2 markers.
Conclusions:
- The enteroendocrine lineage, including mature EE cells, represents a significant reservoir of ISCs.
- These EE-derived ISCs are capable of both homeostatic maintenance and injury-induced regeneration.
- Findings expand the understanding of cellular plasticity and stemness in the intestinal epithelium.
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