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Updated: Feb 27, 2026

Detection of Rare Mutations in CtDNA Using Next Generation Sequencing
Published on: August 24, 2017
AuNP-CTG based probing system targeting CAG repeat DNA and RNA sequences
Binh Huy Le1, Han Na Joo2, Do Won Hwang3
1Department of Bioactive Material Sciences, Chonbuk National University, South Korea.
We developed a gold nanoparticle-based probe system for detecting CAG repeat sequences in DNA and RNA. This sensitive system shows fluorescence changes and can be used in cells without transfection reagents.
Area of Science:
- Biotechnology
- Molecular Biology
- Nanotechnology
Background:
- CAG repeat sequences are associated with various neurological disorders.
- Accurate detection of these sequences is crucial for diagnosis and research.
- Existing detection methods may lack sensitivity or require complex procedures.
Purpose of the Study:
- To develop a novel gold nanoparticle-colloidal gold (AuNP-CTG) based probing system.
- To enable sensitive detection of CAG repeat sequences in DNA and RNA.
- To demonstrate the system's applicability in cellular environments.
Main Methods:
- Synthesis of a AuNP-CTG based probing system.
- Utilizing rolling circle amplification (RCA) for signal amplification.
- Employing fluorescence changes to indicate target detection.
- Testing the system in HeLa cells for DNA and RNA detection.
Main Results:
- The AuNP-CTG system successfully detected various lengths of CAG repeat sequences.
- The system demonstrated efficient transfection into HeLa cells without reagents.
- Significant fluorescence changes were observed upon detection of target CAG repeats.
- The system exhibited high sensitivity, detecting picomolar amounts of target DNA with signal amplification.
- Detection of RNA CAG repeat sequences was also achieved.
Conclusions:
- The developed AuNP-CTG probing system offers a sensitive and versatile method for detecting DNA and RNA CAG repeat sequences.
- The system's ability to function within cells without transfection reagents simplifies experimental procedures.
- This technology holds promise for diagnostic applications and further research into CAG repeat-associated diseases.
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