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Published on: November 5, 2014
290 metagenome-assembled genomes from the Mediterranean Sea: a resource for marine microbiology
Benjamin J Tully1, Rohan Sachdeva2, Elaina D Graham2
1Center for Dark Energy Biosphere Investigations, University of Southern California, Los Angeles, CA, USA.
Abstract:
The Tara Oceans Expedition has provided large, publicly-accessible microbial metagenomic datasets from a circumnavigation of the globe. Utilizing several size fractions from the samples originating in the Mediterranean Sea, we have used current assembly and binning techniques to reconstruct 290 putative draft metagenome-assembled bacterial and archaeal genomes, with an estimated completion of ≥50%, and an additional 2,786 bins, with estimated completion of 0-50%. We have submitted our results, including initial taxonomic and phylogenetic assignments, for the putative draft genomes to open-access repositories for the scientific community to use in ongoing research.
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