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OptisampleTM: Open web-based application to optimize sampling strategies for active surveillance activities at the
Anna Alba1, Robert E Morrison1, Ann Cheeran1
1Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, United States of America.
Plos One
|July 19, 2017
Summary
Optimizing swine herd sampling for Porcine Reproductive and Respiratory Syndrome virus (PRRSv) freedom is crucial for economic reasons. The OptisampleTM tool helps design cost-effective surveillance strategies tailored to specific herd conditions.
Area of Science:
- Veterinary Epidemiology
- Animal Health Surveillance
- Bioinformatics
Background:
- Porcine Reproductive and Respiratory Syndrome virus (PRRSv) poses significant economic threats to the global swine industry.
- Active surveillance is essential for demonstrating PRRSv freedom in swine herds.
- Designing efficient surveillance strategies is complex due to varying herd factors and resource limitations.
Purpose of the Study:
- To introduce OptisampleTM, an open web-based application for optimizing swine herd sampling strategies.
- To develop a model that substantiates freedom from infection while considering testing costs.
- To provide a flexible tool for designing cost-effective PRRSv surveillance schemes.
Main Methods:
- Development of a web-based application, OptisampleTM, incorporating herd size, expected prevalence, test sensitivity, confidence levels, pathogen introduction risk, herd structure, and sampling over time.
- Simulation and comparison of diverse sampling schemes for hypothetical swine herds under various epidemiological scenarios.
- Application of the model to active surveillance of PRRSv.
Main Results:
- OptisampleTM optimizes sampling strategies for PRRSv surveillance, balancing effectiveness and cost.
- Consideration of herd-specific epidemiological factors and sample selection is vital for demonstrating disease freedom.
- The model identified cost-effective sampling schemes for different herd situations.
Conclusions:
- OptisampleTM provides a valuable tool for enhancing the efficiency and cost-effectiveness of animal disease surveillance.
- Tailoring surveillance strategies to individual herd dynamics and epidemiological context is critical for accurate disease freedom claims.
- The developed approach can be adapted for surveillance of other animal diseases.
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