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Published on: October 21, 2014
Crystal structure of an orthomyxovirus matrix protein reveals mechanisms for self-polymerization and membrane
Wenting Zhang1,2, Wenjie Zheng1, Yukimatsu Toh1
1Department of BioSciences, Rice University, Houston, TX 77251.
Abstract:
Many enveloped viruses encode a matrix protein. In the influenza A virus, the matrix protein M1 polymerizes into a rigid protein layer underneath the viral envelope to help enforce the shape and structural integrity of intact viruses. The influenza virus M1 is also known to mediate virus budding as well as the nuclear export of the viral nucleocapsids and their subsequent packaging into nascent viral particles. Despite extensive studies on the influenza A virus M1 (FLUA-M1), only crystal structures of its N-terminal domain are available. Here we report the crystal structure of the full-length M1 from another orthomyxovirus that infects fish, the infectious salmon anemia virus (ISAV). The structure of ISAV-M1 assumes the shape of an elbow, with its N domain closely resembling that of the FLUA-M1. The C domain, which is connected to the N domain through a flexible linker, is made of four α-helices packed as a tight bundle. In the crystal, ISAV-M1 monomers form infinite 2D arrays with a network of interactions involving both the N and C domains. Results from liposome flotation assays indicated that ISAV-M1 binds membrane via electrostatic interactions that are primarily mediated by a positively charged surface loop from the N domain. Cryoelectron tomography reconstruction of intact ISA virions identified a matrix protein layer adjacent to the inner leaflet of the viral membrane. The physical dimensions of the virion-associated matrix layer are consistent with the 2D ISAV-M1 crystal lattice, suggesting that the crystal lattice is a valid model for studying M1-M1, M1-membrane, and M1-RNP interactions in the virion.
Insights
The crystal structure of infectious salmon anemia virus matrix protein (ISAV-M1) reveals an elbow shape and 2D arrays, providing a model for viral structure and assembly. This research advances understanding of matrix protein functions in enveloped viruses.
Area of Science:
- Virology
- Structural Biology
- Biochemistry
Background:
- Enveloped viruses utilize matrix proteins for structural integrity and assembly.
- Influenza A virus matrix protein (FLUA-M1) functions are well-studied, but only its N-terminal domain structure is known.
- Infectious salmon anemia virus (ISAV) is an important fish pathogen within the Orthomyxoviridae family.
Purpose of the Study:
- To determine the full-length crystal structure of the ISAV matrix protein (ISAV-M1).
- To investigate the interactions of ISAV-M1 with membranes and its potential role in viral assembly.
- To establish a structural model for understanding matrix protein functions in enveloped viruses.
Main Methods:
- X-ray crystallography to determine the full-length ISAV-M1 structure.
- Liposome flotation assays to study ISAV-M1 membrane binding.
- Cryoelectron tomography to visualize the matrix protein layer in intact ISAV virions.
Main Results:
- The ISAV-M1 structure exhibits an elbow conformation with N and C domains linked flexibly.
- ISAV-M1 monomers form 2D arrays in crystals, suggesting a potential assembly mechanism.
- ISAV-M1 binds to membranes via electrostatic interactions mediated by a positively charged N-terminal loop.
- Cryo-ET confirmed a matrix protein layer in ISAV virions consistent with the crystal lattice model.
Conclusions:
- The 2D crystal lattice of ISAV-M1 serves as a valid model for studying M1-M1, M1-membrane, and M1-RNP interactions.
- Understanding ISAV-M1 structure and interactions provides insights into matrix protein roles in enveloped virus assembly and structural biology.
- This study offers a structural basis for further research into Orthomyxoviridae matrix proteins and potential antiviral strategies.
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