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Deciphering mechanisms of acquired T790M mutation after EGFR inhibitors for NSCLC by computational simulations
Bin Zou1, Victor H F Lee2, Lijiang Chen1,3
1Department of Electronic Engineering, City University of Hong Kong, Kowloon, Hong Kong, China.
Abstract:
Metastatic non-small-cell lung cancer (NSCLC) with activating EGFR mutations responds very well to first and second generation tyrosine-kinase inhibitors (TKI) including gefitinib, erlotinib and afatinib. Unfortunately, drug resistance will eventually develop and about half of the cases are secondary to the emergence of acquired T790M somatic mutation. In this work, we prospectively recruited 68 patients with metastatic EGFR-mutated NSCLC who have developed progressive disease after first-line TKI with or without subsequent TKI and/or other systemic therapy. Liquid biopsy after progression to their last line of systemic therapy were taken for detection of acquired T790M mutation. By performing attribute ranking we found that several attributes, including the initial EGFR mutational type, had a high correlation with the presence of acquired T790M mutation. We also conducted computational studies and discovered that the EGFR mutation delE746_A750 had a lower stability around the residue T790 than delS752_I759 and L858R, which was consistent with our clinical observation that patients with delE746_A750 were more likely to acquire T790M mutation than those with delS752_I759 or L858R. Our results provided new insight to future direction of research on investigating the mechanisms of acquired T790M mutation, which is essential to the development of novel mutation-specific TKIs.
Insights
Drug resistance in EGFR-mutated non-small cell lung cancer (NSCLC) often involves the T790M mutation. Initial EGFR mutation type influences the likelihood of developing this resistance, guiding future TKI development.
Area of Science:
- Oncology
- Molecular Biology
- Pharmacology
Background:
- Metastatic non-small-cell lung cancer (NSCLC) with EGFR mutations initially responds well to tyrosine kinase inhibitors (TKIs).
- Acquired T790M mutation is a common mechanism of resistance to first and second-generation TKIs in NSCLC.
- Understanding resistance mechanisms is crucial for developing effective, next-generation therapies.
Purpose of the Study:
- To prospectively investigate the correlation between initial EGFR mutational status and the acquisition of T790M resistance mutations in NSCLC patients.
- To explore the molecular basis of T790M acquisition using computational methods.
Main Methods:
- Prospective recruitment of 68 metastatic EGFR-mutated NSCLC patients progressing on TKI therapy.
- Liquid biopsy for detecting acquired T790M mutations post-treatment.
- Attribute ranking to identify factors associated with T790M acquisition.
- Computational studies to assess EGFR mutation stability.
Main Results:
- Initial EGFR mutational type was identified as a significant factor correlating with T790M acquisition.
- The EGFR delE746_A750 mutation showed lower stability around residue T790 compared to delS752_I759 and L858R.
- Patients with delE746_A750 were more prone to acquiring the T790M mutation.
Conclusions:
- The specific type of initial EGFR mutation impacts the likelihood of developing T790M-mediated resistance in NSCLC.
- Computational findings support clinical observations, highlighting the role of mutation stability.
- These insights are vital for developing novel, mutation-specific TKIs to overcome acquired resistance.
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