Related Experiment Video
Updated: Feb 25, 2026

Ferritinophagy: Assessing the Selective Degradation of Iron by Autophagy in Human Fibroblasts
Published on: February 23, 2024
Expression and characterization of the ferritin binding domain of Nuclear Receptor Coactivator-4 (NCOA4)
Magdalena Gryzik1, Ayush Srivastava1, Giovanna Longhi2
1Molecular Biology Laboratory, Department of Molecular and Translational Medicine (DMMT), University of Brescia, Viale Europa 11, Brescia, Italy.
Abstract:
Ferritinophagy is the process of autophagic degradation of ferritin that participates in the regulation of cellular iron homeostasis. This process was shown to be mediated by the selective cargo-receptor Nuclear Receptor Coactivator-4 (NCOA4) that binds ferritin and targets it to emerging autophagosome. To characterize some of the biochemical properties of the interaction between the two proteins we cloned and expressed in E. coli the ferritin-binding domain of human NCOA4, fragment 383-522. It was purified and subjected to biochemical analysis. The NCOA4(383-522) fragment was expressed in soluble and dimeric form, and CD spectra indicated low level of secondary structure. The Ferritin binding activity of the fragment was investigated by developing an electrophoretic mobility shift and an ELISA assays. They showed that the NCOA4 fragment binds the H-ferritin with an affinity in the nM range, but not the R23A H-ferritin mutant and the L-ferritin chain, confirming the high specificity for the H-chain. The H-ferritin could bind up to 24 NCOA4(383-522) fragments forming highly stable and insoluble complexes. The binding was partially inhibited only by Fe(II) among the various divalent metal ions analyzed. The iron-dependent, highly-specific formation of the remarkably stable H-ferritin-NCOA4 complex shown in this work may be important for the characterization of the mechanism of ferritinophagy.
Insights
Nuclear Receptor Coactivator-4 (NCOA4) binds H-ferritin with high specificity and affinity, forming stable complexes. This interaction is crucial for understanding ferritinophagy and cellular iron regulation.
Area of Science:
- Cellular Biology
- Biochemistry
- Molecular Mechanisms
Background:
- Ferritinophagy regulates cellular iron homeostasis through autophagic degradation of ferritin.
- Nuclear Receptor Coactivator-4 (NCOA4) acts as a selective cargo receptor, mediating ferritin recognition and targeting for degradation.
- Understanding the NCOA4-ferritin interaction is key to elucidating ferritinophagy mechanisms.
Purpose of the Study:
- To biochemically characterize the interaction between the ferritin-binding domain of NCOA4 and H-ferritin.
- To determine the specificity and affinity of the NCOA4 fragment for different ferritin forms.
- To investigate the influence of metal ions on the NCOA4-ferritin complex formation.
Main Methods:
- Cloning, expression, and purification of the NCOA4(383-522) fragment in E. coli.
- Circular Dichroism (CD) spectroscopy to assess secondary structure.
- Electrophoretic mobility shift assays (EMSA) and ELISA to study ferritin binding.
- Biochemical analysis of metal ion effects on complex formation.
Main Results:
- The NCOA4(383-522) fragment was expressed as a soluble, dimeric form with low secondary structure.
- NCOA4 fragment demonstrated high-affinity (nM range) and specific binding to H-ferritin, but not to L-ferritin or a specific H-ferritin mutant.
- H-ferritin bound up to 24 NCOA4 fragments, forming stable, insoluble complexes.
- Fe(II) partially inhibited the binding among tested divalent metal ions.
Conclusions:
- The NCOA4 ferritin-binding domain exhibits high specificity for H-ferritin.
- The formation of stable H-ferritin-NCOA4 complexes is iron-dependent and crucial for ferritinophagy.
- These findings provide insights into the molecular basis of ferritinophagy and iron regulation.
More Related Videos
05:43A Protein Preparation Method for the High-throughput Identification of Proteins Interacting with a Nuclear Cofactor Using LC-MS/MS Analysis
Published on: January 24, 2017
12:44Electrophoretic Mobility Shift Assay EMSA for the Study of RNA-Protein Interactions: The IRE/IRP Example
Published on: December 3, 2014
Related Concept Videos
Co-activators and Co-repressors
Co-activators and Co-repressors
Transducer Mechanism: Nuclear Receptors
About 48 different soluble family members of nuclear receptors are identified that can be divided into two main classes:
Cooperative Binding of Transcription Regulators
Cooperative Binding of Transcription Regulators
Regulation of Nuclear Protein Sorting