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Updated: Feb 25, 2026

Studying RNA Interactors of Protein Kinase RNA-Activated during the Mammalian Cell Cycle
Published on: March 5, 2019
p38 MAPK inhibits nonsense-mediated RNA decay in response to persistent DNA damage in noncycling cells
Andrew Nickless1, Abigael Cheruiyot1, Kevin C Flanagan1
1From the Department of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, Missouri 63110 and.
Abstract:
Persistent DNA damage induces profound alterations in gene expression that, in turn, influence tissue homeostasis, tumorigenesis, and cancer treatment outcome. However, the underlying mechanism for gene expression reprogramming induced by persistent DNA damage remains poorly understood. Here, using a highly effective bioluminescence-based reporter system and other tools, we report that persistent DNA damage inhibits nonsense-mediated RNA decay (NMD), an RNA surveillance and gene-regulatory pathway, in noncycling cells. NMD suppression by persistent DNA damage required the activity of the p38α MAPK. Activating transcription factor 3 (ATF3), an NMD target and a key stress-inducible transcription factor, was stabilized in a p38α- and NMD-dependent manner following persistent DNA damage. Our results reveal a novel p38α-dependent pathway that regulates NMD activity in response to persistent DNA damage, which, in turn, controls ATF3 expression in affected cells.
Insights
Persistent DNA damage halts nonsense-mediated RNA decay (NMD) in noncycling cells. This process, regulated by p38α MAPK, impacts gene expression and stabilizing ATF3, crucial for cellular stress response.
Area of Science:
- Molecular Biology
- Cellular Biology
- Genetics
Background:
- Persistent DNA damage significantly alters gene expression, affecting tissue homeostasis, tumorigenesis, and cancer treatment.
- The precise mechanisms driving gene expression reprogramming due to persistent DNA damage are not fully understood.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying gene expression changes induced by persistent DNA damage.
- To investigate the role of nonsense-mediated RNA decay (NMD) in response to DNA damage.
Main Methods:
- Utilized a bioluminescence-based reporter system to monitor RNA decay.
- Employed molecular biology techniques to study protein activity and gene regulation.
- Investigated the involvement of p38α MAPK and ATF3 in the DNA damage response.
Main Results:
- Persistent DNA damage was found to inhibit nonsense-mediated RNA decay (NMD) in noncycling cells.
- NMD suppression was dependent on the activity of p38α MAPK.
- Activating transcription factor 3 (ATF3) stabilization occurred in a manner dependent on both p38α and NMD.
Conclusions:
- A novel p38α-dependent pathway regulates NMD activity in response to persistent DNA damage.
- This pathway controls the expression of ATF3, a key stress-inducible transcription factor, in damaged cells.
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