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Multicellular organisms contain a variety of structurally and functionally distinct cell types, but the DNA in all the cells originated from the same parent cells. The differences in the cells can be attributed to the differential gene expression. Liver cells, whose functions include detoxification of blood, production of bile to metabolize fats, and synthesis of proteins essential for metabolism, must express a specific set of genes to perform their functions. Gene expression also varies with...
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Mesenchymal stem cells (MSCs) are adult stem cells that can differentiate into most connective tissue cell types, except for hematopoietic cells, depending upon the source of MSCs. For example, bone-marrow-derived MSCs (BM-MSCs) can differentiate into osteocytes, hepatocytes, and pancreatic and neuronal cells. MSCs can be isolated from various sources such as bone marrow, placenta, adipose tissue, teeth, and Wharton’s jelly, a gelatinous substance in the umbilical cord. The ease of their...
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Isolating Mesangiogenic Progenitor Cells MPCs from Human Bone Marrow
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Differentially expressed genes in PPARγ-deficient MSCs.

Yun Su1, Xiaona Shen2, Jie Chen3

  • 1Department of Neuroscience & Regenerative Medicine, USA.

Molecular and Cellular Endocrinology
|August 5, 2017
PubMed
Summary
This summary is machine-generated.

Peroxisome proliferator-activated receptor gamma (PPARγ) regulates adipogenesis, metabolism, and immunity. Gene expression analysis in PPARγ knockout cells revealed novel pathways and networks impacted by this nuclear receptor.

Keywords:
AdipocyteBone marrowDifferential expressionInflammationMSCPPARγRNA-Seq

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Area of Science:

  • Molecular Biology
  • Genomics
  • Cell Biology

Background:

  • Peroxisome proliferator-activated receptor gamma (PPARγ) is a nuclear transcription factor crucial for adipogenesis, energy metabolism, inflammation, and immunity.
  • PPARγ influences gene expression and biological processes directly or indirectly through interactions with other factors.

Purpose of the Study:

  • To investigate the global gene expression profile and identify genes and pathways regulated by PPARγ.
  • To elucidate the broad functional impact of PPARγ in various biological processes.

Main Methods:

  • RNA deep sequencing (RNA-Seq) was performed on multipotent mesenchymal stromal cells (MSCs) from PPARγ knockout and wild-type control mice.
  • Bioinformatic analyses were applied to the RNA-Seq data to reveal changes in gene expression and associated pathways.

Main Results:

  • The study identified novel genes and molecular networks modulated by PPARγ.
  • Significant alterations in gene expression and pathway activity were observed in the absence of PPARγ.

Conclusions:

  • PPARγ plays a significant role in regulating global gene expression.
  • These findings offer new insights into the physiological and pathophysiological roles of PPARγ in health and disease.