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Quantification of Site-specific Protein Lysine Acetylation and Succinylation Stoichiometry Using Data-independent Acquisition Mass Spectrometry
Published on: April 4, 2018
The first succinylome profile of Trichophyton rubrum reveals lysine succinylation on proteins involved in various key
Xingye Xu1, Tao Liu1, Jian Yang1
1MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, No. 6, Rongjing East Street, BDA, Beijing, 100176, China.
Background:
Dermatophytes, the most common cause of fungal infections, affect millions of individuals worldwide. They pose a major threat to public health because of the severity and longevity of infections caused by dermatophytes and their refractivity to therapy. Trichophyton rubrum (T. rubrum), the most common dermatophyte species, is a promising model organism for dermatophyte research. Post-translational modifications (PTMs) have been shown to be essential for many biological processes, particularly in the regulation of key cellular processes that contribute to pathogenicity. Although PTMs have important roles, little is known about their roles in T. rubrum and other dermatophytes. Succinylation is a new PTM that has recently been identified. In this study, we assessed the proteome-wide succinylation profile of T. rubrum. This study sought to systematically identify the succinylated sites and proteins in T. rubrum and to reveal the roles of succinylated proteins in various cellular processes as well as the differences in the succinylation profiles in different growth stages of the T. rubrum life cycle.
Results:
A total of 569 succinylated lysine sites were identified in 284 proteins. These succinylated proteins are involved in various cellular processes, such as metabolism, translation and epigenetic regulation. Additionally, 24 proteins related to pathogenicity were found to be succinylated. Comparison of the succinylome at the conidia and mycelia stages revealed that most of the succinylated proteins and sites were growth-stage specific. In addition, the succinylation modifications on histone and ribosomal proteins were significantly different between these two growth stages. Moreover, the sequence features surrounding the succinylated sites were different in the two stages, thus indicating the specific recognition of succinyltransferases in each growth phase.
Conclusions:
In this study, we explored the first T. rubrum succinylome, which is also the first PTM analysis of dermatophytes reported to date. These results revealed the major roles of the succinylated proteins involved in T. rubrum and the differences in the succinylomes between the two major growth stages. These findings should improve understanding of the physiological and pathogenic properties of dermatophytes and facilitate future development of novel drugs and therapeutics for treating superficial fungal infections.
Insights
This study identified 569 succinylated sites on 284 proteins in Trichophyton rubrum, revealing stage-specific modifications crucial for fungal growth and pathogenicity. These findings offer insights into dermatophyte physiology and potential therapeutic targets.
Area of Science:
- Biochemistry
- Molecular Biology
- Mycology
Background:
- Dermatophytes cause widespread fungal infections, often resistant to treatment.
- Trichophyton rubrum (T. rubrum) is a key dermatophyte species and a model for research.
- Post-translational modifications (PTMs) regulate cellular processes, but their role in dermatophytes is understudied.
Purpose of the Study:
- To systematically identify succinylated proteins and sites in T. rubrum.
- To investigate the roles of succinylated proteins in cellular processes and pathogenicity.
- To compare succinylation profiles across different T. rubrum growth stages.
Main Methods:
- Proteome-wide analysis of T. rubrum.
- Identification of succinylated lysine sites using mass spectrometry.
- Comparative analysis of succinylomes between conidia and mycelia stages.
Main Results:
- Identified 569 succinylated lysine sites on 284 proteins.
- Succinylated proteins are involved in metabolism, translation, and epigenetic regulation.
- 24 succinylated proteins are linked to pathogenicity, with stage-specific modifications observed, particularly on histone and ribosomal proteins.
Conclusions:
- This is the first exploration of the T. rubrum succinylome and the initial PTM analysis in dermatophytes.
- The study highlights the significant roles of succinylated proteins in T. rubrum's physiology and pathogenicity.
- Findings advance understanding of dermatophyte biology and may aid in developing new antifungal therapies.
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