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Updated: Feb 25, 2026

Robust DNA Isolation and High-throughput Sequencing Library Construction for Herbarium Specimens
Published on: March 8, 2018
Scientific user requirements for a herbarium data portal
Jorick Vissers1, Frederik Van den Bosch1, Ann Bogaerts2
1Clockwork, Ordina, Blarenberglaan 3B, B-2800 Mechelen, Belgium.
Digitizing herbaria and providing online access enhances global plant collection accessibility, improving taxonomic efficiency. User requirements analysis for a new web portal focused on taxonomists, ecologists, and historians revealed needs for comprehensive, interlinked data and interactive features.
Area of Science:
- Botany and Biodiversity Science
- Digital Humanities
- Information Science
Background:
- Digitization of herbaria and online access are crucial for global plant collection accessibility.
- This initiative aims to improve taxonomic research efficiency and reduce scientific inequalities.
- The Botanic Garden Meise is digitizing 1.2 million specimens, including label data.
Purpose of the Study:
- To conduct a user requirements analysis for a new herbarium web portal.
- To identify essential functionalities for software development and data acquisition.
- To prioritize features based on the needs of primary users: taxonomists, ecologists, and historians.
Main Methods:
- Conducted interactive interviews with potential users from universities, research institutions, science-policy initiatives, and the Botanic Garden Meise.
- Focused on the needs of taxonomists, ecologists, and historians as primary users.
- Analyzed requirements for data accessibility, interlinking, and interactive features.
Main Results:
- Users require comprehensive specimen data, interlinked with other digital resources.
- Demand for interactive systems allowing online comments and corrections to improve data reliability.
- Essential data fields include taxonomic name, location, date, collector, and collection number.
- High-quality images are valued for data verification, even with transcribed labels.
- Disagreement exists regarding user access levels and data/image manipulation permissions.
Conclusions:
- User needs highlight the importance of accessible, interlinked, and verifiable digital herbarium data.
- Current technical and regulatory landscapes present challenges to fully implementing all user requirements.
- The study provides guidance for other herbaria prioritizing digitization investments and web functionality.
- No off-the-shelf solution currently meets all identified user requirements.
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