Related Experiment Video
Updated: Feb 25, 2026

An In Vitro Protocol for Evaluating MicroRNA Levels, Functions, and Associated Target Genes in Tumor Cells
Published on: May 21, 2019
PTPN9 promotes cell proliferation and invasion in Eca109 cells and is negatively regulated by microRNA-126
Junwei Zhu1, Haomiao Li1, Jun Ma2
1Department of Thoracic Surgery, The Affiliated Tumor Hospital of Zhengzhou University, Zhengzhou, Henan 450008, P.R. China.
Abstract:
Protein tyrosine phosphatase non-receptor type 9 (PTPN9), also named PTP-MEG2, is an important member of the protein tyrosine phosphatase family that is involved in variety of human diseases. However, the role of PTPN9 in esophageal squamous cell carcinoma (ESCC) remains to be established. The present evaluated the potential effect and underlying mechanism of action of PTPN9 in ESCC. Immunohistochemistry was performed to detect PTPN9 protein expression in 84 ESCC tumor specimens and 30 normal esophageal tissues. The association between positive expression of PTPN9 and clinicopathological features and prognosis was analyzed. The prognostic role of PTPN9 was further investigated using multivariate regression analysis. PTPN9-small interfering RNA and microRNA (miR-126)-mimics were transfected into Eca109 cells to construct PTPN9 silencing and an miR-126 ectopic expression cell model. Reverse transcription-quantitative polymerase chain reaction, western blot analysis, cell counting kit-8, Transwell assays and flow cytometry were used to investigate the role of PTPN9 in the process of ESCC progression and its potential downstream signaling pathway. Immunohistochemical analysis revealed that PTPN9 was upregulated in ESCC tumor specimens compared with normal esophageal tissues. The χ2 test indicated that positive expression of PTPN9 was correlated with tumor node metastasis stage, tumor classification and node classification. Patients with PTPN9 positive expression had shorter survival time, compared with those that were PTPN9 negative. Multivariate regression analysis with the Cox proportional hazards regression model revealed that PTPN9 expression was a prognostic factor of overall survival for patients with ESCC. Using RNA interference, the present study demonstrated that knockdown of PTPN9 significantly suppressed cell proliferation and invasion in Eca109. Additionally, it was hypothesized that miR-126, described as a tumor suppressor in ESCC, may act at least in part via its inhibition of PTPN9 at the post-transcriptional level. To the best of our knowledge, this is the first study to demonstrate that PTPN9 is overexpressed in ESCC and associated with poor survival, and may therefore be important in the pathogenesis of ESCC.
Insights
Protein tyrosine phosphatase non-receptor type 9 (PTPN9) is upregulated in esophageal squamous cell carcinoma (ESCC), correlating with poor prognosis. Silencing PTPN9 suppressed ESCC cell proliferation and invasion, suggesting it as a potential therapeutic target.
Area of Science:
- Molecular Biology
- Oncology
- Biochemistry
Background:
- Protein tyrosine phosphatase non-receptor type 9 (PTPN9) is implicated in various human diseases.
- The specific role of PTPN9 in esophageal squamous cell carcinoma (ESCC) pathogenesis was previously unestablished.
- Understanding PTPN9's function in ESCC is crucial for developing targeted therapies.
Purpose of the Study:
- To investigate the expression levels of PTPN9 in ESCC tissues.
- To analyze the correlation between PTPN9 expression and clinicopathological features and prognosis in ESCC patients.
- To elucidate the underlying molecular mechanisms of PTPN9 in ESCC progression.
Main Methods:
- Immunohistochemistry was used to assess PTPN9 protein expression in ESCC and normal esophageal tissues.
- Statistical analyses, including χ² tests and multivariate regression (Cox proportional hazards model), were employed.
- RNA interference (siRNA) and miRNA mimics were used to study PTPN9 and miR-126 function in ESCC cell lines (Eca109), with assays for proliferation, invasion, and apoptosis.
Main Results:
- PTPN9 was significantly upregulated in ESCC tissues compared to normal tissues.
- Positive PTPN9 expression correlated with advanced tumor node metastasis (TNM) stage, tumor classification, and node classification.
- PTPN9 overexpression was associated with shorter overall survival in ESCC patients and suppressed cell proliferation and invasion upon knockdown.
Conclusions:
- PTPN9 is overexpressed in ESCC and serves as a significant prognostic factor for poor survival.
- PTPN9 knockdown inhibits ESCC cell proliferation and invasion, highlighting its oncogenic role.
- MiR-126 may regulate PTPN9 post-transcriptionally, suggesting a potential regulatory axis in ESCC pathogenesis.
Related Concept Videos
mTOR Signaling and Cancer Progression
The mTOR pathway or the...
Abnormal Proliferation
MicroRNAs
MicroRNAs
Negative Regulator Molecules
PI3K/mTOR/AKT Signaling Pathway

