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Updated: Feb 25, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry UPLC-MS
Published on: March 14, 2013
Ambient mass spectrometry in metabolomics
Chaevien S Clendinen1, María Eugenia Monge, Facundo M Fernández
1School of Chemistry and Biochemistry & Petit Institute for Bioengineering & Bioscience (IBB), Georgia Institute of Technology, 901 Atlantic Drive NW, Atlanta, GA, USA. facundo.fernandez@chemistry.gatech.edu.
Ambient mass spectrometry (MS) offers rapid, direct analysis for metabolomics, simplifying sample prep. This review explores ambient MS applications across health, food science, and more.
Area of Science:
- Analytical Chemistry
- Biochemistry
- Mass Spectrometry
Background:
- Ambient mass spectrometry (MS) methods, including desorption electrospray ionization (DESI), are increasingly utilized across diverse scientific fields.
- These techniques offer advantages like minimal sample preparation, rapid analysis of various sample types (liquids, solids, gases), and in situ/in vivo capabilities.
- Metabolomics, the study of small molecules (<1.5 kDa) in biological systems, benefits significantly from ambient MS for characterizing dynamic molecular changes.
Purpose of the Study:
- To review the broad applications of various ambient MS techniques within the field of metabolomics.
- To highlight the advantages of ambient MS in analyzing the complex and dynamic metabolome.
- To cover key applications in four primary fields where metabolomics is commonly employed.
Main Methods:
- Utilizing desorption electrospray ionization (DESI) and other ambient MS techniques for direct sample analysis.
- Adjusting experimental parameters to selectively desorb and ionize metabolites with diverse chemical properties.
- Employing mass spectrometry for high-speed and sensitive analysis of ionized metabolites.
Main Results:
- Ambient MS enables rapid and direct analysis of the metabolome with limited sample preparation.
- The techniques facilitate in situ, in vivo, and imaging capabilities for comprehensive metabolic profiling.
- Metabolites, including endogenous compounds, secondary metabolites, dietary chemicals, and microbial metabolites, can be effectively characterized.
Conclusions:
- Ambient MS techniques, particularly DESI, have significantly advanced metabolomics research.
- These methods provide efficient and sensitive tools for understanding complex biological systems.
- The review underscores the versatility and impact of ambient MS across multiple scientific disciplines.
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