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Updated: Feb 25, 2026

Isolation of Culturable Yeasts and Molds from Soils to Investigate Fungal Population Structure
Published on: May 27, 2022
Discovery of Aspergillus frankstonensis sp. nov. during environmental sampling for animal and human fungal pathogens
Jessica J Talbot1, Jos Houbraken2, Jens C Frisvad3
1Sydney School of Veterinary Science, Faculty of Science, The University of Sydney, Camperdown, New South Wales, Australia.
Abstract:
Invasive fungal infections (IFI) due to species in Aspergillus section Fumigati (ASF), including the Aspergillus viridinutans species complex (AVSC), are increasingly reported in humans and cats. The risk of exposure to these medically important fungi in Australia is unknown. Air and soil was sampled from the domiciles of pet cats diagnosed with these IFI and from a nature reserve in Frankston, Victoria, where Aspergillus viridinutans sensu stricto was discovered in 1954. Of 104 ASF species isolated, 61% were A. fumigatus sensu stricto, 9% were AVSC (A. felis-clade and A. frankstonensis sp. nov.) and 30% were other species (30%). Seven pathogenic ASF species known to cause disease in humans and animals (A. felis-clade, A. fischeri, A. thermomutatus, A. lentulus, A. laciniosus A. fumisynnematus, A. hiratsukae) comprised 25% of isolates overall. AVSC species were only isolated from Frankston soil where they were abundant, suggesting a particular ecological niche. Phylogenetic, morphological and metabolomic analyses of these isolates identified a new species, A. frankstonensis that is phylogenetically distinct from other AVSC species, heterothallic and produces a unique array of extrolites, including the UV spectrum characterized compounds DOLD, RAIMO and CALBO. Shared morphological and physiological characteristics with other AVSC species include slow sporulation, optimal growth at 37°C, no growth at 50°C, and viriditoxin production. Overall, the risk of environmental exposure to pathogenic species in ASF in Australia appears to be high, but there was no evidence of direct environmental exposure to AVSC species in areas where humans and cats cohabitate.
Insights
Environmental exposure to pathogenic Aspergillus fungi in Australia is high, particularly for species causing invasive fungal infections (IFI) in humans and pets. However, the specific Aspergillus viridinutans species complex was only found in a nature reserve, not in homes.
Area of Science:
- Mycology
- Environmental microbiology
- Fungal genetics
Background:
- Invasive fungal infections (IFI) caused by Aspergillus section Fumigati (ASF) species are a growing concern in human and feline health.
- The prevalence and environmental risk of exposure to ASF, including the Aspergillus viridinutans species complex (AVSC), in Australia remain largely uncharacterized.
Purpose of the Study:
- To assess the risk of environmental exposure to pathogenic ASF species in Australia.
- To investigate the ecological niche and phylogenetic characteristics of AVSC species in Australia.
- To identify and characterize novel ASF species.
Main Methods:
- Environmental sampling of air and soil from pet cat domiciles and a nature reserve in Frankston, Victoria.
- Isolation and identification of ASF species using phylogenetic, morphological, and metabolomic analyses.
- Phylogenetic, morphological, and physiological characterization of novel AVSC species.
Main Results:
- 104 ASF species were isolated; 61% were Aspergillus fumigatus sensu stricto, 9% were AVSC (including a new species, Aspergillus frankstonensis sp. nov.), and 30% were other ASF species.
- Seven known pathogenic ASF species constituted 25% of all isolates.
- AVSC species were exclusively found in Frankston soil, indicating a specific ecological niche.
- A new species, Aspergillus frankstonensis, was identified with distinct phylogenetic and metabolomic profiles.
Conclusions:
- The risk of environmental exposure to pathogenic ASF species in Australia is substantial.
- While AVSC species were found in a natural environment, no direct environmental exposure was detected in areas shared by humans and pets.
- The discovery of Aspergillus frankstonensis expands our understanding of fungal biodiversity and potential pathogens.
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