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Use of an Influenza Antigen Microarray to Measure the Breadth of Serum Antibodies Across Virus Subtypes
Published on: July 26, 2019
Genome characterization, antigenicity and pathogenicity of a novel infectious bronchitis virus type isolated from
Lei Jiang1, Wenjun Zhao1, Zongxi Han1
1Division of Avian Infectious Diseases, State Key Laboratory of Veterinary Biotechnology, Harbin Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Harbin 150001, People's Republic of China.
Abstract:
In 2014, three infectious bronchitis virus (IBV) strains, designated as γCoV/ck/China/I0111/14, γCoV/ck/China/I0114/14 and γCoV/ck/China/I0118/14, were isolated and identified from chickens suspected to be infected with IBV in Guangxi province, China. Based upon data arising from S1 sequence and phylogenetic analyses, the three IBV isolates were genetically different from other known IBV types, which represented a novel genotype (GI-29). Virus cross-neutralization tests, using γCoV/ck/China/I0111/14 as a representative, showed that genotype GI-29 was antigenically different from all other known IBV types, thus representing a novel serotype. Complete genomic analysis showed that GI-29 type viruses were closely related to and might originate from a GX-YL5-like virus by accumulation of substitutions in multiple genes. These GI-29 viral genomes are still evolving and diverging, particularly in the 3' region, although we cannot rule out the possibility of recombination events occurring. For isolate γCoV/ck/China/I0114/14, we found that recombination events had occurred between nsps 2 and 3 in gene 1 which led to the introduction of a 4/91 gene fragment into the γCoV/ck/China/I0114/14 viral genome. In addition, we found that the GI-29 type γCoV/ck/China/I0111/14 isolate was a nephropathogenic strain and high pathogenic to 1-day-old specific pathogen-free (SPF) chickens although cystic oviducts were not observed in the surviving layer chickens challenged with γCoV/ck/China/I0111/14 isolate.
Insights
Three novel infectious bronchitis virus (IBV) strains, GI-29 genotype, were identified in China. These IBV strains represent a new serotype and show high pathogenicity in chickens.
Area of Science:
- Veterinary Virology
- Avian Infectious Diseases
- Molecular Epidemiology
Background:
- Infectious Bronchitis Virus (IBV) causes significant economic losses in the poultry industry worldwide.
- Continuous evolution and emergence of novel IBV genotypes pose challenges for disease control and vaccine development.
- Previous studies have documented various IBV genotypes, but novel strains continue to emerge.
Purpose of the Study:
- To identify and characterize novel infectious bronchitis virus (IBV) strains circulating in Guangxi province, China.
- To determine the genetic and antigenic distinctiveness of the newly isolated IBV strains.
- To investigate the genomic evolution, potential origins, and pathogenicity of the novel IBV genotype.
Main Methods:
- Isolation and identification of IBV strains from suspected cases in chickens.
- S1 gene sequencing and phylogenetic analysis to determine genetic relationships.
- Virus cross-neutralization tests to assess antigenic properties.
- Complete genome sequencing and comparative genomic analysis.
- Pathogenicity studies in specific pathogen-free (SPF) chickens.
Main Results:
- Three IBV strains (γCoV/ck/China/I0111/14, γCoV/ck/China/I0114/14, γCoV/ck/China/I0118/14) were isolated, representing a novel genotype (GI-29).
- Phylogenetic and cross-neutralization tests confirmed GI-29 as a new genotype and serotype, antigenically distinct from known IBV types.
- Genomic analysis indicated GI-29 viruses may have originated from GX-YL5-like viruses, with ongoing evolution and potential recombination events, including a 4/91 gene fragment in one isolate.
- The GI-29 type isolate γCoV/ck/China/I0111/14 demonstrated nephropathogenicity and high pathogenicity in 1-day-old SPF chickens.
Conclusions:
- The emergence of the novel IBV genotype GI-29 in China highlights the dynamic evolution of IBV.
- GI-29 represents a new serotype, necessitating updated diagnostic and vaccination strategies.
- The nephropathogenic and highly pathogenic nature of this strain poses a significant threat to poultry health.
- Further monitoring of GI-29 evolution and recombination is crucial for effective control of infectious bronchitis.
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