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Related Concept Videos

The Eukaryotic Promoter Region02:40

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The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences.  The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
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Genetic screens are tools used to identify genes and mutations responsible for phenotypes of interest. Genetic screens help identify individuals or a group of people at risk of developing  genetic diseases and help them with early intervention, targeted therapy, and reproductive options.
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Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
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The organization of prokaryotic genes in their genome is notably different from that of eukaryotes. Prokaryotic genes are organized, such that the genes for proteins involved in the same biochemical process or function are located together in groups. This group of genes, along with their regulatory elements, are collectively known as an operon. The functional genes in an operon are transcribed together to give a single strand of mRNA known as polycistronic mRNA.
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Related Experiment Video

Updated: Feb 24, 2026

High-throughput Screening for Chemical Modulators of Post-transcriptionally Regulated Genes
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Functional Screening of Core Promoter Activity.

Dan Y Even1, Adi Kedmi1, Diana Ideses1

  • 1The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Life Sciences Building (212) Room 102, Ramat-Gan, Israel.

Methods in Molecular Biology (Clifton, N.J.)
|August 13, 2017
PubMed
Summary

This study presents a method to analyze engineered core promoter functions using the EGFP reporter gene. This approach allows for the screening of potent core promoters for gene expression manipulation.

Keywords:
Core promoter elementsEngineered promotersFACS analysisLive cell imagingReporter gene analysis

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Area of Science:

  • Molecular Biology
  • Genetics
  • Biotechnology

Background:

  • Core promoters are crucial DNA sequences regulating gene transcription initiation.
  • Engineered core promoters offer potential for precise control of gene expression levels.

Purpose of the Study:

  • To describe a methodology for the qualitative and quantitative analysis of engineered core promoter functions.
  • To enable the screening of potent core promoters for gene expression manipulation.

Main Methods:

  • Utilizing an EGFP reporter gene driven by distinct engineered core promoters.
  • Transfecting expression plasmids into mammalian cell lines for fluorescence monitoring via live cell imaging and flow cytometry.
  • Performing real-time quantitative PCR to confirm transcriptional activity independent of DNA uptake differences.

Main Results:

  • Demonstrated a robust method for analyzing engineered core promoter activity.
  • Successfully screened potent engineered core promoters for extended functional analysis.
  • Validated the accuracy of the methodology in assessing promoter-specific transcriptional output.

Conclusions:

  • The described methodology provides a reliable approach for functional screening of engineered core promoter activity.
  • This technique facilitates the rational design and optimization of core promoters for gene expression control.
  • The study highlights the potential of engineered promoters in biotechnology and synthetic biology applications.