Massively parallel single-nucleus RNA-seq with DroNc-seq
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Updated: Feb 24, 2026

Isolation of Adult Spinal Cord Nuclei for Massively Parallel Single-nucleus RNA Sequencing
Published on: October 12, 2018
Naomi Habib1,2,3, Inbal Avraham-Davidi1, Anindita Basu1,4
1Klarman Cell Observatory, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA.
Abstract:
Single-nucleus RNA sequencing (sNuc-seq) profiles RNA from tissues that are preserved or cannot be dissociated, but it does not provide high throughput. Here, we develop DroNc-seq: massively parallel sNuc-seq with droplet technology. We profile 39,111 nuclei from mouse and human archived brain samples to demonstrate sensitive, efficient, and unbiased classification of cell types, paving the way for systematic charting of cell atlases.
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