Related Experiment Video
Updated: Feb 23, 2026

Isolation and Analysis of Microbial Communities in Soil, Rhizosphere, and Roots in Perennial Grass Experiments
Published on: July 24, 2018
Microbial communities with distinct denitrification potential in spruce and beech soils differing in nitrate leaching
Jiří Bárta1, Karolina Tahovská2, Hana Šantrůčková2
1Department of Ecosystem Biology, Faculty of Science, University of South Bohemia, Branišovská 31, 370 05, České Budějovice, Czech Republic. jiri.barta@prf.jcu.cz.
Forest soil microbes influence nitrogen loss after acid rain recovery. Different tree types, like spruce and beech, foster distinct microbial communities, impacting nitrate reduction and ecosystem nitrogen retention.
Area of Science:
- Forest Ecology
- Soil Microbiology
- Biogeochemical Cycling
Background:
- Elevated acid deposition poses a significant global threat to ecosystems, primarily through nitrogen leaching.
- Understanding variable nitrate losses in European forests post-acid deposition is crucial for ecosystem management.
- Forest vegetation type influences soil properties and microbial communities, affecting nitrogen cycling.
Purpose of the Study:
- To investigate the link between soil microbial functional characteristics and variable nitrate losses in recovering European forests.
- To compare nitrogen cycling microbial guilds in adjacent beech and spruce forests with differing acidification recovery and nitrate leaching.
- To identify potential keystone microbial species influencing nitrogen immobilization and ecosystem retention.
Main Methods:
- Reconstruction of soil microbial functional traits related to nitrogen and carbon cycling based on community composition analysis.
- Comparison of microbial communities in adjacent beech and spruce forest soils with contrasting acidification levels and nitrogen leaching.
- Assessment of the ratio of denitrification to dissimilative nitrogen reduction to ammonium (DNRA) as an indicator of nitrate loss pathways.
Main Results:
- Acidic spruce soils (high C, Acidobacteria/Actinobacteria dominant) showed high potential for nitrate loss via denitrification (denitrification:DNRA ratio = 3).
- Less acidic beech soils (low C, high N availability, Proteobacteria dominant) had lower denitrification potential (denitrification:DNRA ratio = 1), potentially increasing nitrate availability.
- Distinct microbial guilds, including DNRA-capable microbes in beech and denitrifiers in spruce, were identified, suggesting vegetation-driven functional specialization.
Conclusions:
- Vegetation dominance (beech vs. spruce) drives distinct soil microbial functional guilds, even after acid deposition impacts.
- These microbial differences significantly influence nitrogen immobilization potentials and the overall nitrogen retention capacity of forest ecosystems.
- Understanding these microbial dynamics is key to predicting and managing nitrogen leaching in recovering forest ecosystems.
More Related Videos
Related Concept Videos
The Roles of Bacteria and Fungi in Plant Nutrition
Environmental Applications of Microorganisms
Inorganic Nitrogen Assimilation
Metabolism of Chemolithotrophs
Microbial Nutrition
Overview of Nitrogen Metabolism
The largest pool of nitrogen available in the terrestrial ecosystem is gaseous nitrogen (N2) from the air, but this...

