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Origin and Evolution of the Universal Genetic Code.

Eugene V Koonin1, Artem S Novozhilov2

  • 1National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, Maryland 20894, USA;

Annual Review of Genetics
|August 31, 2017
PubMed
Summary
This summary is machine-generated.

The standard genetic code

Keywords:
aminoacyl–tRNA synthetasesanticodonscodonscoevolution theoryerror minimizationevolution of translationfrozen accidentstandard genetic codestereochemical theoryuniversal genetic code

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Area of Science:

  • Evolutionary biology
  • Molecular biology
  • Genetics

Background:

  • The standard genetic code (SGC) is nearly universal across life.
  • Deviations from the SGC are rare and secondary.
  • Universality may stem from the detrimental effects of altering the code and its impact on gene transfer.

Purpose of the Study:

  • To propose a model for the evolution of the standard genetic code.
  • To explain the robustness and universality of the SGC.
  • To integrate findings on proto-tRNA recognition and code expansion.

Main Methods:

  • Phylogenetic analysis of translation system components, specifically aminoacyl-tRNA synthetases.
  • Review of existing literature on the SGC, frozen accident hypothesis, and horizontal gene transfer.
  • Development of a theoretical model for primordial code expansion.

Main Results:

  • The SGC's structure is nonrandom, offering robustness against errors.
  • Error minimization is likely a byproduct of primordial code expansion driven by amino acid diversification.
  • Early amino acid-codon correspondence involved RNA molecules (proto-tRNAs) recognizing amino acids via sites distinct from anticodons.

Conclusions:

  • A plausible scenario for the genetic code's evolution combines proto-tRNA recognition, code expansion through duplication, and the 'frozen accident' principle.
  • This model suggests that the genetic code's current structure is a result of both functional constraints and historical contingency.
  • The proposed evolutionary pathway is experimentally testable.