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Updated: Feb 23, 2026

Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
Global Inhibition with Specific Activation: How p53 and MYC Redistribute the Transcriptome in the DNA Double-Strand
Joshua R Porter1, Brian E Fisher1, Laura Baranello1
1Laboratory of Pathology, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Abstract:
In response to stresses, cells often halt normal cellular processes, yet stress-specific pathways must bypass such inhibition to generate effective responses. We investigated how cells redistribute global transcriptional activity in response to DNA damage. We show that an oscillatory increase of p53 levels in response to double-strand breaks drives a counter-oscillatory decrease of MYC levels. Using RNA sequencing (RNA-seq) of newly synthesized transcripts, we found that p53-mediated reduction of MYC suppressed general transcription, with the most highly expressed transcripts reduced to a greater extent. In contrast, upregulation of p53 targets was relatively unaffected by MYC suppression. Reducing MYC during the DNA damage response was important for cell-fate regulation, as counteracting MYC repression reduced cell-cycle arrest and elevated apoptosis. Our study shows that global inhibition with specific activation of transcriptional pathways is important for the proper response to DNA damage; this mechanism may be a general principle used in many stress responses.
Insights
Cells balance general transcription suppression with targeted gene activation during DNA damage responses. This involves p53-driven MYC reduction, crucial for regulating cell fate and stress adaptation.
Area of Science:
- Molecular Biology
- Cell Biology
- Genetics
Background:
- Cells halt normal processes under stress but require specific pathways for effective responses.
- Understanding transcriptional regulation during DNA damage is crucial for cell fate.
- p53 and MYC are key regulators of cellular processes and stress responses.
Purpose of the Study:
- To investigate how cells redistribute global transcriptional activity in response to DNA damage.
- To elucidate the role of p53 and MYC in regulating transcription during DNA damage.
- To determine the impact of MYC suppression on cell-fate decisions.
Main Methods:
- RNA sequencing (RNA-seq) of newly synthesized transcripts.
- Analysis of p53 and MYC oscillations in response to double-strand breaks.
- Experimental manipulation of MYC levels during DNA damage response.
Main Results:
- p53 oscillations lead to counter-oscillatory MYC decrease.
- p53-mediated MYC suppression reduces global transcription, particularly highly expressed genes.
- Upregulation of p53 targets is largely independent of MYC suppression.
- Counteracting MYC repression reduces cell-cycle arrest and increases apoptosis.
Conclusions:
- Global transcriptional suppression coupled with specific pathway activation is vital for DNA damage response.
- The p53-MYC axis plays a critical role in cell-fate regulation during DNA damage.
- This regulatory mechanism may be a general principle in cellular stress responses.
Related Concept Videos
Abnormal Proliferation
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
Negative Regulator Molecules
Inhibition of Cdk Activity
The Intrinsic Apoptotic Pathway

