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Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Novel heterozygous NOTCH3 pathogenic variant found in two Chinese patients with CADASIL
Shufeng Li1, Yifan Chen1, Haitao Shan1
1Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Department of Biochemistry and Molecular Biology, Medical School of Southeast University, Nanjing 210009, China.
Insights
Researchers identified a novel pathogenic NOTCH3 gene variant in two Chinese patients with cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL). This finding advances understanding of CADASIL genetic causes.
Area of Science:
- Genetics
- Neurology
- Molecular Biology
Background:
- Cerebral Autosomal Dominant Arteriopathy with Subcortical Infarcts and Leukoencephalopathy (CADASIL) is a hereditary cerebrovascular disease.
- NOTCH3 gene mutations are the primary known cause of CADASIL.
Observation:
- Two patients from a Chinese family presented with clinical symptoms consistent with CADASIL.
- Whole genome sequencing was employed to investigate the genetic basis of the disease in these patients.
Findings:
- A novel heterozygous variant, c.128G>C (p.Cys43Ser), in the NOTCH3 gene was identified in both patients.
- This variant, leading to a cysteine-to-serine substitution at codon 43, was classified as pathogenic according to ACMG guidelines.
- Other identified variants in HTRA1, COL4A1, and COL4A2 were deemed benign.
Implications:
- This discovery expands the spectrum of known NOTCH3 mutations associated with CADASIL.
- The findings contribute to the genetic diagnosis and understanding of CADASIL in the Chinese population.
- Further research may explore the functional impact of this specific NOTCH3 variant on vascular health.
Abstract:
NOTCH3 mutations have been described to cause cerebral autosomal dominant arteriopathy with subcortical infarcts and leukoencephalopathy (CADASIL). Here, we report 2 CADASIL patients from a Chinese family. Whole genome sequencing was performed on the two CADASIL patients. The novel variant c.128G>C in exon 2 of NOTCH3 was identified and confirmed through PCR-Sanger sequencing (Human Genome Variation Society nomenclature: HGVS: NOTCH3 c.128G>C; p.Cys43Ser). The heterozygous NOTCH3 variant cause a cysteine to serine substitution at codon 43. According to the variant interpretation guideline of American College of Medical Genetics and Genomics (ACMG), this variant was classified as "pathogenic". Other variants in HTRA1, COL4A1 and COL4A2 were also found, they were classified as "benign".
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