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A Nonsequencing Approach for the Rapid Detection of RNA Editing
Published on: April 21, 2022
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Protein recoding by ADAR1-mediated RNA editing is not essential for normal development and homeostasis
Jacki E Heraud-Farlow1,2, Alistair M Chalk1,2, Sandra E Linder3
1St. Vincent's Institute of Medical Research, 9 Princes St, Fitzroy, 3065, VIC, Australia.
Genome Biology
|September 7, 2017
Summary
ADAR1 RNA editing is not essential for mouse development and homeostasis, especially when the MDA5 sensor is absent. Loss of ADAR1 function is primarily due to RNA editing and MDA5-dependent pathways.
Area of Science:
- Molecular Biology
- Genetics
- Immunology
Background:
- Adenosine-to-inosine (A-to-I) RNA editing by ADAR proteins is a key epitranscriptomic modification.
- While ADAR2's role in protein recoding is established, ADAR1's essential functions, including editing-dependent and independent roles, remain unclear.
- ADAR1 critically prevents self-RNA from activating the MDA5 innate immune sensor.
Purpose of the Study:
- To investigate the in vivo consequences of ADAR1 editing deficiency on murine homeostasis.
- To determine the relative contributions of ADAR1's editing-dependent and independent functions.
- To assess ADAR1's role in organismal homeostasis outside of its function in preventing MDA5 activation.
Main Methods:
- Generation and analysis of Adar1 E861A/E861A Ifih1 -/- mice, which lack ADAR1 editing activity but retain MDA5.
- Assessment of A-to-I editing across various adult murine tissues.
- Comparative analysis of Adar1 -/- and Adar1 E861A/E861A alleles on both Ifih1 +/+ and Ifih1 -/- backgrounds.
Main Results:
- Mice lacking ADAR1 editing activity (Adar1 E861A/E861A) in the absence of MDA5 (Ifih1 -/-) exhibited normal lifespan and homeostasis.
- A mild, non-pathogenic innate immune activation signature was observed in these mice.
- ADAR1 performs the majority of RNA editing in most tissues, with limited compensation by ADAR2.
- ADAR1 editing-independent functions appear to contribute minimally to homeostasis.
Conclusions:
- Lifetime absence of ADAR1-mediated RNA editing is well-tolerated in mice lacking MDA5.
- ADAR1-dependent protein recoding is not essential for organismal homeostasis.
- Phenotypes associated with ADAR1 loss result from RNA editing and MDA5-dependent immune activation.
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