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Atomic Scale Structural Studies of Macromolecular Assemblies by Solid-state Nuclear Magnetic Resonance Spectroscopy
Published on: September 17, 2017
Fibril structure of amyloid-β(1-42) by cryo-electron microscopy
Lothar Gremer1,2, Daniel Schölzel1,2, Carla Schenk1
1Institute of Complex Systems, Structural Biochemistry (ICS-6), Forschungszentrum Jülich, 52425 Jülich, Germany.
Abstract:
Amyloids are implicated in neurodegenerative diseases. Fibrillar aggregates of the amyloid-β protein (Aβ) are the main component of the senile plaques found in brains of Alzheimer's disease patients. We present the structure of an Aβ(1-42) fibril composed of two intertwined protofilaments determined by cryo-electron microscopy (cryo-EM) to 4.0-angstrom resolution, complemented by solid-state nuclear magnetic resonance experiments. The backbone of all 42 residues and nearly all side chains are well resolved in the EM density map, including the entire N terminus, which is part of the cross-β structure resulting in an overall "LS"-shaped topology of individual subunits. The dimer interface protects the hydrophobic C termini from the solvent. The characteristic staggering of the nonplanar subunits results in markedly different fibril ends, termed "groove" and "ridge," leading to different binding pathways on both fibril ends, which has implications for fibril growth.
Insights
Researchers revealed the atomic structure of amyloid-beta (Aβ) fibrils, key to Alzheimer's disease. This structure shows how Aβ protein aggregates form, offering insights into disease mechanisms and potential therapeutic targets.
Area of Science:
- Structural Biology
- Neuroscience
- Biochemistry
Background:
- Amyloid fibrils are protein aggregates implicated in neurodegenerative diseases.
- Amyloid-beta (Aβ) fibrils are the primary component of senile plaques in Alzheimer's disease (AD) brains.
- Understanding Aβ fibril structure is crucial for elucidating AD pathogenesis.
Purpose of the Study:
- To determine the high-resolution structure of an amyloid-beta (Aβ)(1-42) fibril.
- To elucidate the molecular architecture of Aβ fibrils and their subunit organization.
- To investigate the structural basis for fibril formation and potential implications for disease progression.
Main Methods:
- Cryo-electron microscopy (cryo-EM) to determine fibril structure to 4.0-angstrom resolution.
- Solid-state nuclear magnetic resonance (ssNMR) experiments for complementary structural data.
- Detailed analysis of the electron density map to resolve backbone and side-chain details.
Main Results:
- The structure of an Aβ(1-42) fibril composed of two intertwined protofilaments was resolved.
- The backbone and most side chains, including the N terminus, were well-resolved, revealing an 'LS'-shaped subunit topology.
- The fibril ends exhibit distinct 'groove' and 'ridge' features, influencing binding pathways and fibril growth dynamics.
Conclusions:
- The determined fibril structure provides unprecedented atomic detail of Aβ aggregation.
- The 'LS'-shaped subunit and distinct fibril ends offer insights into the mechanism of fibril elongation.
- This structural information has significant implications for understanding Alzheimer's disease and developing targeted therapies.
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