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Array Comparative Genomic Hybridization Array CGH for Detection of Genomic Copy Number Variants
Published on: February 21, 2015
Chromosomal Microarray Analysis in Fetuses with Growth Restriction and Normal Karyotype: A Systematic Review and
Antoni Borrell1, Maribel Grande, Montse Pauta
1BCNatal, Department of Maternal-Fetal Medicine, Institute of Gynecology, Obstetrics, and Neonatology, Hospital Clínic Barcelona, Barcelona, Catalonia, Spain.
Objective:
To perform a systematic review of the literature and a meta-analysis to estimate the incremental yield of chromosomal microarray analysis (CMA) over karyotyping in fetal growth restriction (FGR).
Methods:
This was a systematic review conducted in accordance with the PRISMA criteria. All articles identified in PubMed, Ovid Medline, and ISI Web of Knowledge (Web of Science) from January 2009 to November 2016 describing pathogenic copy number variants (CNVs) in fetuses with growth restriction were included. Case reports were excluded. Risk differences were pooled to estimate the overall and stratified CMA incremental yield.
Results:
Ten studies with full data available met the inclusion criteria for analysis. Combined data from these studies revealed a 4% (95% confidence interval [CI] 1-6%) incremental yield of CMA over karyotyping in nonmalformed growth-restricted fetuses, and a 10% (95% CI 6-14%) incremental yield in FGR when associated with fetal malformations. The most frequently found pathogenic CNVs were 22q11.2 duplication, Xp22.3 deletion, and 7q11.23 deletion (Williams-Beuren syndrome), particularly in isolated FGR.
Conclusion:
The use of genomic CMA provides a 4% incremental yield of detecting pathogenic CNVs in fetuses with isolated growth restriction and normal karyotype.
Insights
Chromosomal microarray analysis (CMA) offers a 4% incremental yield over karyotyping for detecting genetic abnormalities in isolated fetal growth restriction (FGR). This enhanced diagnostic capability is crucial for understanding FGR causes.
Area of Science:
- Prenatal diagnostics
- Genetics
- Reproductive medicine
Background:
- Fetal growth restriction (FGR) is a significant obstetric concern with various underlying causes.
- Karyotyping has been the standard for detecting chromosomal abnormalities in FGR, but its resolution is limited.
- Chromosomal microarray analysis (CMA) offers higher resolution for detecting copy number variants (CNVs).
Purpose of the Study:
- To systematically review and meta-analyze the literature.
- To estimate the incremental diagnostic yield of CMA compared to karyotyping in FGR.
- To identify common pathogenic CNVs detected by CMA in FGR cases.
Main Methods:
- Systematic literature review adhering to PRISMA criteria.
- Searched PubMed, Ovid Medline, and Web of Science (Jan 2009-Nov 2016).
- Included studies reporting pathogenic CNVs in fetuses with FGR; excluded case reports.
- Pooled risk differences to calculate incremental yield.
Main Results:
- Ten studies met inclusion criteria.
- CMA showed a 4% incremental yield over karyotyping in nonmalformed FGR fetuses (95% CI 1-6%).
- CMA demonstrated a 10% incremental yield in FGR associated with fetal malformations (95% CI 6-14%).
- Common pathogenic CNVs included 22q11.2 duplication, Xp22.3 deletion, and 7q11.23 deletion.
Conclusions:
- Genomic CMA provides a significant incremental yield for detecting pathogenic CNVs in isolated FGR with a normal karyotype.
- CMA enhances the diagnostic accuracy for genetic causes of FGR, particularly when malformations are present.
- The findings support the use of CMA as a valuable tool in the genetic evaluation of FGR.
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