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Updated: Feb 23, 2026

Isolation of Culturable Yeasts and Molds from Soils to Investigate Fungal Population Structure
Published on: May 27, 2022
Combined genotyping strategy reveals structural differences between Aspergillus flavus lineages from different
Nikolett Baranyi1, Sándor Kocsubé1, Daniela Jakšić Despot2
1Faculty of Science and Informatics, Department of Microbiology, University of Szeged, Szeged, Hungary.
Abstract:
Aspergillus flavus is a filamentous fungus which is widespread on agricultural products and also able to cause various human diseases. This species is frequently isolated from indoor air as well, furthermore, it is known as a common causal agent of keratomycosis, particularly in subtropical and tropical areas. It is also able to produce aflatoxins, one of the most carcinogenic mycotoxins which are harmful to animals and humans. In this study, 59 A. flavus isolates from four different habitats and 1 A. minisclerotigenes isolate were investigated. The isolates were identified and confirmed at the species level by the sequence analysis of a part of their calmodulin gene. Applying a combined analysis of UP-PCR, microsatellite, and calmodulin sequence data, the four group of isolates formed separate clusters on the phylogenetic tree. Examining the distribution of mating type genes MAT1-1 and MAT1-2, a ratio of approximately 3:1 was determined, and no correlation was found between the carried mating type gene and the aflatoxin production capability. HPLC analysis revealed that none of the examined isolates collected from indoor air or maize in Central Europe were able to produce aflatoxins, while about half of the isolates from India produced these mycotoxins under the test conditions.
Insights
Aspergillus flavus, a fungus found on crops and in homes, can cause disease and produce harmful aflatoxins. This study found that European isolates did not produce aflatoxins, unlike some Indian isolates.
Area of Science:
- Mycology
- Environmental Microbiology
- Food Safety
Background:
- Aspergillus flavus is a ubiquitous filamentous fungus impacting agriculture and human health.
- This species is a known producer of aflatoxins, potent carcinogens harmful to humans and animals.
- A. flavus is also implicated in human diseases like keratomycosis and frequently found in indoor environments.
Purpose of the Study:
- To genetically characterize Aspergillus flavus isolates from diverse habitats.
- To investigate the prevalence of aflatoxin production in different geographical locations and environments.
- To determine the correlation between mating type genes and aflatoxin production.
Main Methods:
- Isolate identification and confirmation using calmodulin gene sequencing.
- Phylogenetic analysis employing combined UP-PCR, microsatellite, and calmodulin sequence data.
- High-Performance Liquid Chromatography (HPLC) for aflatoxin detection.
- Analysis of mating type genes (MAT1-1 and MAT1-2) distribution.
Main Results:
- Phylogenetic analysis revealed four distinct clusters among the A. flavus isolates.
- A mating type gene ratio of approximately 3:1 (MAT1-1:MAT1-2) was observed.
- No correlation was found between mating type gene presence and aflatoxin production capability.
- None of the Central European isolates (indoor air, maize) produced aflatoxins, whereas approximately 50% of Indian isolates did.
Conclusions:
- Geographical origin and habitat significantly influence aflatoxin production in Aspergillus flavus.
- European A. flavus isolates from indoor air and maize do not appear to pose an aflatoxin risk under tested conditions.
- Further research is needed to understand the genetic and environmental factors governing aflatoxin biosynthesis in different A. flavus populations.
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