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Bacillus subtilis RecA with DprA-SsbA antagonizes RecX function during natural transformation
Shimin Le1,2, Ester Serrano3, Ryo Kawamura1,2
1Department of Physics, National University of Singapore, 117551, Singapore.
Nucleic Acids Research
|September 16, 2017
Summary
Bacillus subtilis transformation relies on RecA protein regulation. DprA-SsbA and RecX proteins form a new network, with DprA-SsbA antagonizing RecX to enable RecA filament formation for efficient transformation.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- RecA protein is essential for DNA repair and recombination.
- Bacillus subtilis transformation efficiency is influenced by regulatory proteins like DprA and RecX.
- Understanding the interplay between RecA, DprA, RecX, and single-stranded DNA binding proteins (SsbA, SsbB) is key to elucidating transformation mechanisms.
Purpose of the Study:
- To investigate the regulatory roles of Bacillus subtilis DprA and RecX proteins in RecA-mediated DNA transformation.
- To elucidate the mechanism by which DprA-SsbA and RecX modulate RecA filament dynamics on single-stranded DNA.
- To understand how these interactions influence chromosomal and plasmid transformation efficiency.
Main Methods:
- In vitro biochemical assays to study protein-DNA interactions.
- Analysis of RecA filament formation and dynamics in the presence of RecX, DprA, SsbA, and SsbB.
- Competition assays for binding to single-stranded DNA.
- DNA strand exchange assays.
Main Results:
- RecA·ATP binding could not displace RecX, SsbA, or SsbB from single-stranded DNA, while RecA·dATP showed partial displacement.
- RecX promoted reversible depolymerization of RecA·ATP filaments.
- The DprA-SsbA complex reversed RecX-mediated inhibition of RecA filament extension.
- RecX inhibited DNA strand exchange when added before RecA, but this inhibition was reversed when RecX was added after RecA.
- RecA nucleation was more sensitive to RecX than filament growth.
Conclusions:
- DprA-SsbA facilitates the formation of active RecA filaments, directly counteracting RecX inhibition.
- RecX and DprA alter RecA filament dynamics, which is crucial for chromosomal transformation.
- DprA-SsbA and RecX represent a novel regulatory network controlling RecA function during natural transformation in Bacillus subtilis.
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