Related Experiment Video
Updated: Feb 22, 2026

11:38
A Quantitative Glycomics and Proteomics Combined Purification Strategy
Published on: March 8, 2016
15.5K
Direct quantification of protein glycan phosphorylation
Stephanie A Ketcham1, Muhammad Ashraf1, Chikkathur N Madhavarao1
1Division of Product Quality Research, Office of Testing and Research, Office of Pharmaceutical Quality, Center for Drug Evaluation and Research (CDER), Food and Drug Administration (FDA), Silver Spring, MD.
Biotechniques
|September 16, 2017
Summary
A new method quantifies protein phosphorylation using a phosphate-specific dye and standard equipment. This technique accurately measures phosphorylation on glycans and amino acids, simplifying analysis for protein therapeutics.
Area of Science:
- Biochemistry
- Analytical Chemistry
- Protein Science
Background:
- Phosphorylation is a key post-translational modification (PTM) crucial for protein function and therapeutic efficacy.
- Existing methods for phosphorylation quantification are often complex, indirect, or require specialized equipment.
- Accurate assessment of phosphorylation is vital for quality control of protein-based therapeutics.
Purpose of the Study:
- To develop and validate a simplified method for quantifying protein phosphorylation.
- To adapt a phosphate-specific binding dye for measuring phosphorylation on both glycans and protein backbones.
- To assess the reliability of this new method by comparing results with established data.
Main Methods:
- Utilized a phosphate-specific binding dye with common laboratory instruments.
- Applied the method to quantify relative amounts of phosphorylated glycans.
- Assessed phosphorylation of amino acid residues on protein backbones.
Main Results:
- The developed method successfully quantified phosphorylation on glycans and protein amino acid residues.
- Results for phosphorylated glycosylation sites on lysosomal enzymes (GUS and cathepsin D) aligned with published data.
- Demonstrated the utility of the dye-based approach for relative phosphorylation quantification.
Conclusions:
- The adapted dye-based method offers a more accessible approach for quantifying protein phosphorylation.
- This technique can be valuable for assessing critical quality attributes of protein therapeutics.
- The method provides reliable quantification of phosphorylation, comparable to existing data.

