Understanding the Processes Underpinning Patterns of Phylogenetic Regionalization
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Updated: Feb 22, 2026

Using Phylogenetic Analysis to Investigate Eukaryotic Gene Origin
Published on: August 14, 2018
Barnabas H Daru1, Tammy L Elliott2, Daniel S Park3
1Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138, USA; Department of Plant Sciences, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa.
Abstract:
A key step in understanding the distribution of biodiversity is the grouping of regions based on their shared elements. Historically, regionalization schemes have been largely species centric. Recently, there has been interest in incorporating phylogenetic information into regionalization schemes. Phylogenetic regionalization can provide novel insights into the mechanisms that generate, distribute, and maintain biodiversity. We argue that four processes (dispersal limitation, extinction, speciation, and niche conservatism) underlie the formation of species assemblages into phylogenetically distinct biogeographic units. We outline how it can be possible to distinguish among these processes, and identify centers of evolutionary radiation, museums of diversity, and extinction hotspots. We suggest that phylogenetic regionalization provides a rigorous and objective classification of regional diversity and enhances our knowledge of biodiversity patterns.
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