Related Experiment Video
Updated: Feb 22, 2026

Selecting Multiple Biomarker Subsets with Similarly Effective Binary Classification Performances
Published on: October 11, 2018
biospear: an R package for biomarker selection in penalized Cox regression
Nils Ternès1,2, Federico Rotolo1,2, Stefan Michiels1,2
1Gustave Roussy, Université Paris-Saclay, Service de biostatistique et d'épidémiologie, Villejuif, F-94805, France.
Summary:
The R package biospear allows selecting the biomarkers with the strongest impact on survival and on the treatment effect in high-dimensional Cox models, and estimating expected survival probabilities. Most of the implemented approaches are based on penalized regression techniques.
Availability And Implementation:
The package is available on the CRAN. (https://CRAN.R-project.org/package=biospear).
Contact:
stefan.michiels@gustaveroussy.fr.
Supplementary Information:
Supplementary data are available at Bioinformatics online.
Related Concept Videos
Parametric Survival Analysis: Weibull and Exponential Methods
Weibull Distribution
The Weibull distribution is a flexible model used in parametric survival analysis. It can handle both increasing and decreasing hazard rates, depending on its shape parameter...
Assumptions of Survival Analysis
Introduction To Survival Analysis
The primary goal of survival analysis is to estimate survival time—the time...
Cancer Survival Analysis
Comparing the Survival Analysis of Two or More Groups
Biostatistics: Overview
Discrete variables are...

