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Scalable collaborative targeted learning for high-dimensional data.

Cheng Ju1, Susan Gruber2, Samuel D Lendle1

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Summary
This summary is machine-generated.

This study introduces scalable algorithms for collaborative targeted minimum loss-based estimation (C-TMLE) in large semi-parametric models. New methods improve computational efficiency and performance, especially with many covariates.

Keywords:
Observational studyelectronic healthcare databasehigh-dimensional datapropensity scoretargeted minimum loss-based estimationvariable selection

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Area of Science:

  • Statistical inference
  • Machine learning
  • Computational statistics

Background:

  • Robust inference in large semi-parametric models requires external estimators.
  • Optimizing multiple estimators improves bias-variance trade-offs for parameter estimation.
  • The original greedy C-TMLE algorithm has scalability issues with numerous covariates.

Purpose of the Study:

  • To develop scalable C-TMLE algorithms for large semi-parametric models.
  • To introduce novel pre-ordering strategies for improved computational efficiency.
  • To present a data-driven approach for selecting optimal pre-ordering strategies.

Main Methods:

  • Developed a novel C-TMLE instantiation with pre-ordered covariates, reducing time complexity.
  • Proposed two pre-ordering strategies and a rule for developing others.
  • Introduced the SL-C-TMLE algorithm for data-driven strategy selection.
  • Compared algorithms via simulations and real-world electronic health database analyses.

Main Results:

  • The greedy C-TMLE algorithm demonstrated unacceptably slow performance on large electronic health databases.
  • Scalable C-TMLE and SL-C-TMLE algorithms showed good performance in simulations.
  • The novel algorithms offer significant computational gains ( vs. ).

Conclusions:

  • Scalable C-TMLE and SL-C-TMLE algorithms effectively address the limitations of the original greedy approach.
  • The developed methods are computationally efficient and perform well in practice.
  • All C-TMLE algorithms are available in a public Julia software package.