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A deep convolutional neural network-based automatic delineation strategy for multiple brain metastases stereotactic
Yan Liu1,2, Strahinja Stojadinovic2, Brian Hrycushko2
1School of Electrical Engineering and Information, Sichuan University, Chengdu, Sichuan, China.
Abstract:
Accurate and automatic brain metastases target delineation is a key step for efficient and effective stereotactic radiosurgery (SRS) treatment planning. In this work, we developed a deep learning convolutional neural network (CNN) algorithm for segmenting brain metastases on contrast-enhanced T1-weighted magnetic resonance imaging (MRI) datasets. We integrated the CNN-based algorithm into an automatic brain metastases segmentation workflow and validated on both Multimodal Brain Tumor Image Segmentation challenge (BRATS) data and clinical patients' data. Validation on BRATS data yielded average DICE coefficients (DCs) of 0.75±0.07 in the tumor core and 0.81±0.04 in the enhancing tumor, which outperformed most techniques in the 2015 BRATS challenge. Segmentation results of patient cases showed an average of DCs 0.67±0.03 and achieved an area under the receiver operating characteristic curve of 0.98±0.01. The developed automatic segmentation strategy surpasses current benchmark levels and offers a promising tool for SRS treatment planning for multiple brain metastases.
Insights
A new deep learning algorithm automatically segments brain metastases on MRI scans. This advanced convolutional neural network (CNN) improves accuracy for stereotactic radiosurgery (SRS) planning.
Area of Science:
- Medical Imaging
- Artificial Intelligence
- Neurosurgery
Background:
- Accurate delineation of brain metastases is crucial for effective stereotactic radiosurgery (SRS).
- Manual segmentation is time-consuming and prone to inter-observer variability.
- Automated methods are needed to improve efficiency and consistency in SRS treatment planning.
Purpose of the Study:
- To develop and validate a deep learning convolutional neural network (CNN) algorithm for automatic brain metastases segmentation.
- To integrate the CNN algorithm into an automated workflow for clinical application.
- To evaluate the performance of the developed algorithm on benchmark and clinical datasets.
Main Methods:
- A deep learning convolutional neural network (CNN) algorithm was developed for segmenting brain metastases.
- The algorithm processed contrast-enhanced T1-weighted magnetic resonance imaging (MRI) datasets.
- The CNN-based algorithm was integrated into an automatic segmentation workflow and validated on BRATS and clinical data.
Main Results:
- Validation on BRATS data achieved average DICE coefficients (DCs) of 0.75±0.07 (tumor core) and 0.81±0.04 (enhancing tumor).
- Performance on clinical patient data showed an average DC of 0.67±0.03 and an area under the ROC curve of 0.98±0.01.
- The algorithm outperformed most techniques in the 2015 BRATS challenge.
Conclusions:
- The developed automatic segmentation strategy surpasses current benchmark levels.
- The CNN-based algorithm offers a promising tool for SRS treatment planning for multiple brain metastases.
- This automated approach enhances accuracy and efficiency in radiotherapy planning for brain tumors.
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