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Genetic and Biochemical Approaches for In Vivo and In Vitro Assessment of Protein Oligomerization: The Ryanodine Receptor Case Study
Published on: July 27, 2016
Robo Ig4 Is a Dimerization Domain
Galit Yom-Tov1, Reut Barak1, Omri Matalon1
1The Mina & Everard Goodman Faculty of Life Sciences, Bar-Ilan University, Ramat-Gan 5290002, Israel.
Abstract:
Robo receptors play pivotal roles in axonal guidance as well as in neurogenesis, angiogenesis, cell migration, and cancer progression and invasiveness. They are considered to be attractive drug targets for the treatment of cancer, ocular neovascular disorders, chronic kidney diseases, and more. Despite their great importance, the mechanisms by which Robo receptors switch from their "off" to "on" states remain obscure. One possibility involves a monomer-to-dimer or dimer-to-monomer transition that facilitates the recruitment and activation of enzymatic effectors to instigate intracellular signaling. However, it is not known which domains mediate Robo dimerization, or the structural properties of the dimeric interactions. Here, we identify the extracellular Ig4 (D4) as a Robo dimerization domain. We have determined the crystal structure of the tandem Ig4-5 domains (D4-5) of human Robo2 and found that a hydrophobic surface on D4 mediates close homotypic contacts with a reciprocal D4. Analytical ultracentrifugation measurements of intact and mutated D4-5 shows that dimerization through the D4 interface is specific and has a dimerization dissociation constant of 16.9μM in solution. Direct fluorescence resonance energy transfer dimerization measurements in HEK293 cells corroborate the dimerization of transmembrane hRobo2 through D4, and a functional COS-7 cell collapse assay links D4-mediated dimerization with Robo intracellular signaling. The high level of conservation in the D4 dimerization interface throughout all Robo orthologs and paralogs implies that D4-mediated dimerization is a central hallmark in Robo activation and signaling.
Insights
Robo receptors are key in cell guidance and disease. This study identifies the Ig4 domain as crucial for Robo receptor dimerization, linking this interaction to cellular signaling and potential drug development.
Area of Science:
- Molecular Biology
- Cell Biology
- Structural Biology
Background:
- Robo receptors are critical for axonal guidance, neurogenesis, angiogenesis, cell migration, and cancer progression.
- They represent promising drug targets for various diseases, including cancer and ocular neovascular disorders.
- The precise mechanisms governing Robo receptor activation, particularly the transition between 'off' and 'on' states, remain largely unknown.
Purpose of the Study:
- To elucidate the molecular mechanisms underlying Robo receptor activation.
- To identify the specific domains responsible for Robo receptor dimerization.
- To investigate the structural basis and functional consequences of Robo receptor dimerization.
Main Methods:
- Crystallography was used to determine the structure of the tandem Ig4-5 domains of human Robo2.
- Analytical ultracentrifugation was employed to assess the specificity and affinity of D4-mediated dimerization in solution.
- Fluorescence resonance energy transfer (FRET) and cell-based assays (COS-7 cell collapse) were utilized to confirm dimerization in cells and link it to intracellular signaling.
Main Results:
- The extracellular Ig4 (D4) domain was identified as the primary mediator of Robo receptor homotypic dimerization.
- The crystal structure revealed a hydrophobic surface on D4 involved in reciprocal homotypic contacts.
- Dimerization through the D4 interface was confirmed to be specific, with a dissociation constant of 16.9μM, and functionally linked to Robo signaling in cellular assays.
Conclusions:
- The Ig4 domain is a key mediator of Robo receptor dimerization, essential for initiating intracellular signaling.
- D4-mediated dimerization represents a conserved mechanism across Robo orthologs and paralogs, highlighting its central role in Robo activation.
- Understanding D4-mediated dimerization provides critical insights for developing targeted therapies for diseases involving Robo signaling.
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